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The map label for this gene is 103486902

Identifier: 103486902

GI number: 103486902

Start: 1470688

End: 1471080

Strand: Reverse

Name: 103486902

Synonym: Sala_1416

Alternate gene names: NA

Gene position: 1471080-1470688 (Counterclockwise)

Preceding gene: 103486903

Following gene: 103486898

Centisome position: 43.98

GC content: 65.9

Gene sequence:

>393_bases
ATGGCGGCATTTGACGGCTCGACCGATGACGGCAAGGCGCGCGGTGCCATGCTCGCCATCGGCGAACTGGCCGAACGCAT
CGGCGTGCCGACACATGTGCTGCGCTATTGGGAAACGCGCTTTCCGCAGCTCAGGCCGCTACAAAGGTCGGGTCGCCGCC
GCTATTACCGCGCCGAAGATGTTGCGCTTGCCGAACGCATCCACCATTTGCTGCATGTGCAGGGCTTCACCGTCGAAGGC
GCGCGCAAGGCGCTCGCGAAAGACGGAGCGGCGCCGACGAGCGTAGCGATCGCCACGCCGACTATCGGTAATGATCCGGC
GCGTAAAGGCGCGGGTGTTCCGGTCGAGGCGCTTGTGGCGCTGCGTGAGCGACTGGCGGCGGCGCTCGATTAG

Upstream 100 bases:

>100_bases
CGGGCGTGGAAGTGCCGATCCTGCCGCGGCGGGTGATGACCTTTCGCGCCAGCCAGTCGATGCGCGCCCGCGTCGCGGGC
AAATAGGCCGGTATCGGCCC

Downstream 100 bases:

>100_bases
AGCGGCCATTTTCCCCTTCCTCATTCCCGCGAAGGCGGGAATGATGGCGTTTTGACGATATGGCGTTTTGACGATGCGGA
AGGTGGGCATCAGACCGGCG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MAAFDGSTDDGKARGAMLAIGELAERIGVPTHVLRYWETRFPQLRPLQRSGRRRYYRAEDVALAERIHHLLHVQGFTVEG
ARKALAKDGAAPTSVAIATPTIGNDPARKGAGVPVEALVALRERLAAALD

Sequences:

>Translated_130_residues
MAAFDGSTDDGKARGAMLAIGELAERIGVPTHVLRYWETRFPQLRPLQRSGRRRYYRAEDVALAERIHHLLHVQGFTVEG
ARKALAKDGAAPTSVAIATPTIGNDPARKGAGVPVEALVALRERLAAALD
>Mature_129_residues
AAFDGSTDDGKARGAMLAIGELAERIGVPTHVLRYWETRFPQLRPLQRSGRRRYYRAEDVALAERIHHLLHVQGFTVEGA
RKALAKDGAAPTSVAIATPTIGNDPARKGAGVPVEALVALRERLAAALD

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14036; Mature: 13905

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFDGSTDDGKARGAMLAIGELAERIGVPTHVLRYWETRFPQLRPLQRSGRRRYYRAED
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
VALAERIHHLLHVQGFTVEGARKALAKDGAAPTSVAIATPTIGNDPARKGAGVPVEALVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
LRERLAAALD
HHHHHHHHCC
>Mature Secondary Structure 
AAFDGSTDDGKARGAMLAIGELAERIGVPTHVLRYWETRFPQLRPLQRSGRRRYYRAED
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHH
VALAERIHHLLHVQGFTVEGARKALAKDGAAPTSVAIATPTIGNDPARKGAGVPVEALVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH
LRERLAAALD
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]