| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is glmU [H]
Identifier: 103486856
GI number: 103486856
Start: 1425447
End: 1426814
Strand: Reverse
Name: glmU [H]
Synonym: Sala_1370
Alternate gene names: 103486856
Gene position: 1426814-1425447 (Counterclockwise)
Preceding gene: 103486858
Following gene: 103486855
Centisome position: 42.65
GC content: 66.81
Gene sequence:
>1368_bases ATGGCAGCGCGCATGAACAACCCGATCGCCGCCATCGTCCTTGCCGCGGGCAAGGGCACCCGCATGAAGTCCGACCTGCA CAAGGTGCTGCACCCGATCGCCGGGCGGCCGATGCTGCTGCACCTGATGGCGAGCGTCGACGAACTGAGCCCCGCGAAAA AGGTGGTCGTTGTCGGCGACAAGGCCGATCAGCTCGAAGCGGCGCTGAGCGGCACCGCGGAGCTTGCGGTGCAGGAGCCG CAGCTCGGCACCGGCCATGCTGTGCGGCAGGCCGAAGCGGCGCTCAGCGGTTTCGATGGCGACGTGCTGATCCTCTATGG CGATGTGCCCTTTGTGCCTGCGGCGACGATGCGCGCGATGCTCGACCGGCTCGGCGCAAGCGACGCCCCGGCGGTCGTCG TCCTCGCGTTCGAGCCCGCCGACCCGCTGCAATATGGCCGCGTCATCACCGACGGCGACCGCGTCGTGAAAATGGTCGAG CATAAGGATGCGACCGACGCGGAGCGTGCGGTGCGGCTCTGCAATTCGGGTCTGATGGCCGCGAGGGCGCGCGATCTGTT CGCGTTGCTCGCGCGCGTCACCGACGACAATGCGGCGAAGGAGTTTTACCTCGTCGATATCGTCAATATCGCGAACGCCG ACGGGCGGCTCTGCGCGGTGGTGAAGACCGATCCCGCCGATGTCGGGGGCATCAACAGCCGCGCCGAACTGGCCGCTGCC GAAGCGCAGTGGCAGGCATTCAGGCGCGAGGAAGCAATGGCGGCCGGCGCGTCGCTGCGCGCCCCCGAAACGGTTTGGTT TTCGTGGGACACCCAACTCGGTCGCGACGTGACGATCGAACCCAATGTCGTCTTCGGCCCCGGCGTAAAAATCGCCGACG GCGCGACGATCCGCGCCTTCAGTCATATCGAGGGCGCGACGATCGGCGCTGGCTGCGAGGTCGGGCCCTTTGCGCGGCTG CGCCCCGGCACGGTGCTCGGCGAAAAGGCGAAGATCGGCAATTTCGTCGAGGTGAAGAAAGCGGTGCTCGGCGCGGGCGC CAAGGCCAATCATCTGACCTATCTCGGCGATGCGACGGTCGGCGCGGGCGCCAACATCGGTGCGGGGACGATAACCTGCA ATTATGACGGCTATTTCAAGCACCAGACGCAGATCGGCGAACGCGCCTTCATCGGATCGAACAGCGCGCTCGTCGCGCCG GTCAAGATCGGCGCCGACGCGATCGTCGCCGCGGGCAGCACGGTGACGCTCGACGTTGGCGACGGCGAATTGCGCATCGT GCGCGGCGAGCAGCTCGTGAAACCCGGCTGGGCCGACCGCTTCCACGACGCGATGCGCAAGAAGAAGGCGGCGGAACAGA AGAAATGA
Upstream 100 bases:
>100_bases ACGAGCGTGCCGTCGAGGTCGAAGCCGACGATCGCAAAAGGAAATCCGTTCATCCCGCGCGCATGGCGCGATGTGCTGGA AACCGCAATGATTTGCTGGC
Downstream 100 bases:
>100_bases GCGACCGTTACACCGACCAGCCCTTCCTGCGCTTCGTCGACGCCTGGGTGCTGAAGGTGATCGGGCATCTCGATCCGGCG ACCGAGGCCTGGTGCAGGGC
Product: bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAARMNNPIAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLLHLMASVDELSPAKKVVVVGDKADQLEAALSGTAELAVQEP QLGTGHAVRQAEAALSGFDGDVLILYGDVPFVPAATMRAMLDRLGASDAPAVVVLAFEPADPLQYGRVITDGDRVVKMVE HKDATDAERAVRLCNSGLMAARARDLFALLARVTDDNAAKEFYLVDIVNIANADGRLCAVVKTDPADVGGINSRAELAAA EAQWQAFRREEAMAAGASLRAPETVWFSWDTQLGRDVTIEPNVVFGPGVKIADGATIRAFSHIEGATIGAGCEVGPFARL RPGTVLGEKAKIGNFVEVKKAVLGAGAKANHLTYLGDATVGAGANIGAGTITCNYDGYFKHQTQIGERAFIGSNSALVAP VKIGADAIVAAGSTVTLDVGDGELRIVRGEQLVKPGWADRFHDAMRKKKAAEQKK
Sequences:
>Translated_455_residues MAARMNNPIAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLLHLMASVDELSPAKKVVVVGDKADQLEAALSGTAELAVQEP QLGTGHAVRQAEAALSGFDGDVLILYGDVPFVPAATMRAMLDRLGASDAPAVVVLAFEPADPLQYGRVITDGDRVVKMVE HKDATDAERAVRLCNSGLMAARARDLFALLARVTDDNAAKEFYLVDIVNIANADGRLCAVVKTDPADVGGINSRAELAAA EAQWQAFRREEAMAAGASLRAPETVWFSWDTQLGRDVTIEPNVVFGPGVKIADGATIRAFSHIEGATIGAGCEVGPFARL RPGTVLGEKAKIGNFVEVKKAVLGAGAKANHLTYLGDATVGAGANIGAGTITCNYDGYFKHQTQIGERAFIGSNSALVAP VKIGADAIVAAGSTVTLDVGDGELRIVRGEQLVKPGWADRFHDAMRKKKAAEQKK >Mature_454_residues AARMNNPIAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLLHLMASVDELSPAKKVVVVGDKADQLEAALSGTAELAVQEPQ LGTGHAVRQAEAALSGFDGDVLILYGDVPFVPAATMRAMLDRLGASDAPAVVVLAFEPADPLQYGRVITDGDRVVKMVEH KDATDAERAVRLCNSGLMAARARDLFALLARVTDDNAAKEFYLVDIVNIANADGRLCAVVKTDPADVGGINSRAELAAAE AQWQAFRREEAMAAGASLRAPETVWFSWDTQLGRDVTIEPNVVFGPGVKIADGATIRAFSHIEGATIGAGCEVGPFARLR PGTVLGEKAKIGNFVEVKKAVLGAGAKANHLTYLGDATVGAGANIGAGTITCNYDGYFKHQTQIGERAFIGSNSALVAPV KIGADAIVAAGSTVTLDVGDGELRIVRGEQLVKPGWADRFHDAMRKKKAAEQKK
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-GlcNAc. Responsible for the acetylation of Glc-N-1-P to give GlcNAc-1-P and for the uridyl transfer from UTP to GlcNAc-1-P which produces UDP-GlcNAc [H]
COG id: COG1207
COG function: function code M; N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790168, Length=452, Percent_Identity=42.9203539823009, Blast_Score=344, Evalue=8e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005882 - InterPro: IPR018357 - InterPro: IPR001228 - InterPro: IPR011004 [H]
Pfam domain/function: PF01128 IspD [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 47800; Mature: 47669
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARMNNPIAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLLHLMASVDELSPAKKVVVVGD CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC KADQLEAALSGTAELAVQEPQLGTGHAVRQAEAALSGFDGDVLILYGDVPFVPAATMRAM CHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH LDRLGASDAPAVVVLAFEPADPLQYGRVITDGDRVVKMVEHKDATDAERAVRLCNSGLMA HHHHCCCCCCEEEEEEECCCCCHHHCCEEECHHHHHHHHHCCCCCCHHHHHHHHCCCHHH ARARDLFALLARVTDDNAAKEFYLVDIVNIANADGRLCAVVKTDPADVGGINSRAELAAA HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH EAQWQAFRREEAMAAGASLRAPETVWFSWDTQLGRDVTIEPNVVFGPGVKIADGATIRAF HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCEEECCCEEEECCCEEEEE SHIEGATIGAGCEVGPFARLRPGTVLGEKAKIGNFVEVKKAVLGAGAKANHLTYLGDATV CCCCCCEECCCCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCC GAGANIGAGTITCNYDGYFKHQTQIGERAFIGSNSALVAPVKIGADAIVAAGSTVTLDVG CCCCCCCCCEEEECCCCEEEEHHHCCCEEEECCCCCEEEEEEECCCEEEECCCEEEEEEC DGELRIVRGEQLVKPGWADRFHDAMRKKKAAEQKK CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AARMNNPIAAIVLAAGKGTRMKSDLHKVLHPIAGRPMLLHLMASVDELSPAKKVVVVGD CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC KADQLEAALSGTAELAVQEPQLGTGHAVRQAEAALSGFDGDVLILYGDVPFVPAATMRAM CHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH LDRLGASDAPAVVVLAFEPADPLQYGRVITDGDRVVKMVEHKDATDAERAVRLCNSGLMA HHHHCCCCCCEEEEEEECCCCCHHHCCEEECHHHHHHHHHCCCCCCHHHHHHHHCCCHHH ARARDLFALLARVTDDNAAKEFYLVDIVNIANADGRLCAVVKTDPADVGGINSRAELAAA HHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHH EAQWQAFRREEAMAAGASLRAPETVWFSWDTQLGRDVTIEPNVVFGPGVKIADGATIRAF HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCEEECCCEEEECCCEEEEE SHIEGATIGAGCEVGPFARLRPGTVLGEKAKIGNFVEVKKAVLGAGAKANHLTYLGDATV CCCCCCEECCCCCCCCCCCCCCCCEECCHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCC GAGANIGAGTITCNYDGYFKHQTQIGERAFIGSNSALVAPVKIGADAIVAAGSTVTLDVG CCCCCCCCCEEEECCCCEEEEHHHCCCEEEECCCCCEEEEEEECCCEEEECCCEEEEEEC DGELRIVRGEQLVKPGWADRFHDAMRKKKAAEQKK CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA