Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is eamB [H]

Identifier: 103486848

GI number: 103486848

Start: 1419161

End: 1419751

Strand: Direct

Name: eamB [H]

Synonym: Sala_1362

Alternate gene names: 103486848

Gene position: 1419161-1419751 (Clockwise)

Preceding gene: 103486839

Following gene: 103486849

Centisome position: 42.42

GC content: 65.48

Gene sequence:

>591_bases
ATGAACCAGACCACCCTCGCCGCACTCTCTGCCTTCGCGCTTGTCTCGTCGATCACGCCGGGGCCGAACAACATGATGCT
GATGGCGTCGGGCGCCAATTTCGGGCTTCGCCGCACCGTGCCGCATGCGCTGGGCGTCGGCATCGGTTTCACGCTGATGA
TCGTGCTGGTCGGCGTCGGTCTGATGGGACTGTTCGACCTGTTCCCGGTTCTGAACCTTGTGCTCAAGATGGTGAGCGTC
GTTTATCTGCTGTGGCTGGCGTGGAAGATCGCCCACGCCGCAGCGCCCGATACGGCGGGGCGCTCGCGCGGCAAACCGAT
GAGCTTTTTCCAGGCGGTGCTGTTCCAGTGGGTGAACCCCAAGGCCTGGTCGATGGCGCTGACCGCGATCGCGCTTTACG
CCCCCGATCGCAATCTGGCCGCCGTGCTGCTCGTCGCGGCCATCTTCGGCCTCATCAACCTGCCCTCGACGAGCCTGTGG
GCGGTGATGGGCGTGTCGCTGCGCGGCTGGCTGTCGAGTCCGGCGCGGCTCCGCGCATTCAACTGGACGATGGCGGCGTT
GCTCGTCGGATCGCTCGCGCTGCTCATGTGA

Upstream 100 bases:

>100_bases
GCGGCCTATGGCGTCAATTTTGACCATGTATTGCATAATATAACTAAAAACGGCCCATCTTTGCAATCCATAGCGCATCG
AAGCGCATTATATTGCGTCC

Downstream 100 bases:

>100_bases
TTGCAAGGTTGCTGCTTGCAACCTAAAGACGGCGCTCCCCCTTCCTGACCGGAGAAGAGAGCCATGCAAAGCCGCCGCCT
CGGAAAAAGCGCCATCCATG

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV
VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW
AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM

Sequences:

>Translated_196_residues
MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV
VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW
AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM
>Mature_196_residues
MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV
VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW
AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM

Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788932, Length=166, Percent_Identity=28.3132530120482, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 20929; Mature: 20929

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVG
CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMGLFDLFPVLNLVLKMVSVVYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
KAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLWAVMGVSLRGWLSSPARLRAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
NWTMAALLVGSLALLM
HHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVG
CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMGLFDLFPVLNLVLKMVSVVYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
KAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLWAVMGVSLRGWLSSPARLRAF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
NWTMAALLVGSLALLM
HHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA