| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is eamB [H]
Identifier: 103486848
GI number: 103486848
Start: 1419161
End: 1419751
Strand: Direct
Name: eamB [H]
Synonym: Sala_1362
Alternate gene names: 103486848
Gene position: 1419161-1419751 (Clockwise)
Preceding gene: 103486839
Following gene: 103486849
Centisome position: 42.42
GC content: 65.48
Gene sequence:
>591_bases ATGAACCAGACCACCCTCGCCGCACTCTCTGCCTTCGCGCTTGTCTCGTCGATCACGCCGGGGCCGAACAACATGATGCT GATGGCGTCGGGCGCCAATTTCGGGCTTCGCCGCACCGTGCCGCATGCGCTGGGCGTCGGCATCGGTTTCACGCTGATGA TCGTGCTGGTCGGCGTCGGTCTGATGGGACTGTTCGACCTGTTCCCGGTTCTGAACCTTGTGCTCAAGATGGTGAGCGTC GTTTATCTGCTGTGGCTGGCGTGGAAGATCGCCCACGCCGCAGCGCCCGATACGGCGGGGCGCTCGCGCGGCAAACCGAT GAGCTTTTTCCAGGCGGTGCTGTTCCAGTGGGTGAACCCCAAGGCCTGGTCGATGGCGCTGACCGCGATCGCGCTTTACG CCCCCGATCGCAATCTGGCCGCCGTGCTGCTCGTCGCGGCCATCTTCGGCCTCATCAACCTGCCCTCGACGAGCCTGTGG GCGGTGATGGGCGTGTCGCTGCGCGGCTGGCTGTCGAGTCCGGCGCGGCTCCGCGCATTCAACTGGACGATGGCGGCGTT GCTCGTCGGATCGCTCGCGCTGCTCATGTGA
Upstream 100 bases:
>100_bases GCGGCCTATGGCGTCAATTTTGACCATGTATTGCATAATATAACTAAAAACGGCCCATCTTTGCAATCCATAGCGCATCG AAGCGCATTATATTGCGTCC
Downstream 100 bases:
>100_bases TTGCAAGGTTGCTGCTTGCAACCTAAAGACGGCGCTCCCCCTTCCTGACCGGAGAAGAGAGCCATGCAAAGCCGCCGCCT CGGAAAAAGCGCCATCCATG
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM
Sequences:
>Translated_196_residues MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM >Mature_196_residues MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVGLMGLFDLFPVLNLVLKMVSV VYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNPKAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLW AVMGVSLRGWLSSPARLRAFNWTMAALLVGSLALLM
Specific function: Exporter of O-acetylserine (OAS) and cysteine [H]
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family [H]
Homologues:
Organism=Escherichia coli, GI1788932, Length=166, Percent_Identity=28.3132530120482, Blast_Score=69, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001123 [H]
Pfam domain/function: PF01810 LysE [H]
EC number: NA
Molecular weight: Translated: 20929; Mature: 20929
Theoretical pI: Translated: 12.08; Mature: 12.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVG CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LMGLFDLFPVLNLVLKMVSVVYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC KAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLWAVMGVSLRGWLSSPARLRAF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH NWTMAALLVGSLALLM HHHHHHHHHHHHHHHC >Mature Secondary Structure MNQTTLAALSAFALVSSITPGPNNMMLMASGANFGLRRTVPHALGVGIGFTLMIVLVGVG CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LMGLFDLFPVLNLVLKMVSVVYLLWLAWKIAHAAAPDTAGRSRGKPMSFFQAVLFQWVNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC KAWSMALTAIALYAPDRNLAAVLLVAAIFGLINLPSTSLWAVMGVSLRGWLSSPARLRAF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH NWTMAALLVGSLALLM HHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA