Click here to switch to the map view.

The map label for this gene is queC1 [H]

Identifier: 103486841

GI number: 103486841

Start: 1412922

End: 1413605

Strand: Reverse

Name: queC1 [H]

Synonym: Sala_1355

Alternate gene names: 103486841

Gene position: 1413605-1412922 (Counterclockwise)

Preceding gene: 103486842

Following gene: 103486840

Centisome position: 42.26

GC content: 67.84

Gene sequence:

>684_bases
ATGCAGATTATGTCCGGAAAAACGGTGATCGTCCTTTTGTCGGGCGGGCTCGACTCGATGGTCTGCGCGGGCCTCGCGCG
CGAGGCTGGCGCGCGGATCGTCGCGCTGACGATCGACTATAACCAGCGTCACCGCGTCGAGCTGGAATCGGCGGCGCGCA
TTGCGGCGCATGTCGGCGCCGCCGAGCATATCGTCCTGCCGCTCGACCTGCGCCGTTTCGGCGGGTCGGCGCTGACCGCC
GACATCGACGTGCCGAAGGACGGCGTTGGCACCGACATTCCCGTGACCTATGTTCCCGCGCGCAACCTGATCTTCCTGTC
GCTGACGCTGGGGCTGGCCGAGGCGCGGCAGGCCGCGGACATTGTGATCGGCGTCAACGCGCTCGATTATTCGGGTTATC
CCGATTGCCGCCCCGCGTTCATCCAGGGGTTCGAAAAGCTGGCCGCGCTCGCGACGCGCGACGGCGATCAGGGCGTTCGC
TTCCATATCCACGCGCCGCTTCAGCACATGACCAAGGCCGATATCGCCGCCGAGGCGGCGCGGCTCGGCATGGATGCGGC
GATGAGCTGGTCCTGTTATGACCCGACGCCCGAGGGTCTGCACTGCGGGGCATGCGACAGCTGCCGCCTGCGCCGCAAGG
GTTTCGCCGACGCCGGGCTCGCCGACCCGACGCGCTACGCCTGA

Upstream 100 bases:

>100_bases
TTTGCGCCGACCTGGGCCGTGTGGCGATCGCCTCGCGGCCCGTTTCTTTTGACGCGCCGCGGCGCTTGCGTGCCCCGCGA
GTGGGGCCTATCTGGCGCCG

Downstream 100 bases:

>100_bases
ACCCATGGCATATTCGGTCAAAGAGATTTTCCTGACCCTGCAAGGGGAGGGCGCGCAGGCCGGTCGCCGCGCAGTCTTCT
GCCGCTTTGCCGGCTGCAAT

Product: ExsB

Products: NA

Alternate protein names: 7-cyano-7-carbaguanine synthase 1; PreQ(0) synthase 1; Queuosine biosynthesis protein queC 1 [H]

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGAAEHIVLPLDLRRFGGSALTA
DIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVR
FHIHAPLQHMTKADIAAEAARLGMDAAMSWSCYDPTPEGLHCGACDSCRLRRKGFADAGLADPTRYA

Sequences:

>Translated_227_residues
MQIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGAAEHIVLPLDLRRFGGSALTA
DIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVR
FHIHAPLQHMTKADIAAEAARLGMDAAMSWSCYDPTPEGLHCGACDSCRLRRKGFADAGLADPTRYA
>Mature_227_residues
MQIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGAAEHIVLPLDLRRFGGSALTA
DIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQAADIVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVR
FHIHAPLQHMTKADIAAEAARLGMDAAMSWSCYDPTPEGLHCGACDSCRLRRKGFADAGLADPTRYA

Specific function: Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) [H]

COG id: COG0603

COG function: function code R; Predicted PP-loop superfamily ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the queC family [H]

Homologues:

Organism=Escherichia coli, GI1786648, Length=224, Percent_Identity=34.8214285714286, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018317
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06508 ExsB [H]

EC number: NA

Molecular weight: Translated: 24129; Mature: 24129

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGA
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCC
AEHIVLPLDLRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQAAD
CCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHCCCE
IVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMTKADIAAEAA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH
RLGMDAAMSWSCYDPTPEGLHCGACDSCRLRRKGFADAGLADPTRYA
HHCCCHHCEEEECCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQIMSGKTVIVLLSGGLDSMVCAGLAREAGARIVALTIDYNQRHRVELESAARIAAHVGA
CCCCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHCCC
AEHIVLPLDLRRFGGSALTADIDVPKDGVGTDIPVTYVPARNLIFLSLTLGLAEARQAAD
CCEEEEEEEHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEHHHHHHHCCCE
IVIGVNALDYSGYPDCRPAFIQGFEKLAALATRDGDQGVRFHIHAPLQHMTKADIAAEAA
EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHH
RLGMDAAMSWSCYDPTPEGLHCGACDSCRLRRKGFADAGLADPTRYA
HHCCCHHCEEEECCCCCCCEECCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA