| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is suhB [H]
Identifier: 103486799
GI number: 103486799
Start: 1371634
End: 1372452
Strand: Reverse
Name: suhB [H]
Synonym: Sala_1313
Alternate gene names: 103486799
Gene position: 1372452-1371634 (Counterclockwise)
Preceding gene: 103486800
Following gene: 103486797
Centisome position: 41.03
GC content: 65.81
Gene sequence:
>819_bases ATGGCCGTATCCGGCATCATCACCGTCATGGAACGCGCTGCGCGCAAGGCGGGCACCAAGCTGCGCCGCGACTTCGGCGA GATCGAGCATCTGCAGGTTTCGCAGAAAGGCCCGGCCGATTTCGTATCCAAGGCCGATCAGGCCGCCGAGCGCACGCTTT ATGACGAGCTGATCCATGCGCGTCCGGGCTGGGGCTTCCTGATGGAAGAAGCCGGCGAGATCGAGGGCGAACCGGGCAAG CCGCGTTTCATCATCGACCCGCTCGACGGCACCTCGAACTTCCTCCACGCGATCCCGCATTTCGCGATCTCGATCGCGGT GCAGGAGCCGAAACTCGGTGGCGGCTGGGGCGACGTCACCGCGGCGCTGATCTATCAGCCGGTCACCGACGAAAGCTATT GGGCCGAGCGCGGCCGCGGCGCGTGGCTGCACGACCGGCGGCTTCGCGTCGCCTCGCGCCGCCACCTCAACGAATGCCTG ATTTCGACGGGCATCCCCTATATGGGTCATGGCAATATGGCGCAGTGGAGCCGCATTTTCGGTGCGATCGCACCCGAAGT GGCGGGGATCCGCCGCTTCGGCGCGGCCAGCCTCGACCTCGCATGGGTCGCGGCGGGTCGCTACGACGGTTTCTGGGAAA GCGACCTTCAGATATGGGACGTCGCGGCGGGGATGTTGCTGGTGCGCGAGGCCGGTGGTTTCGTGACCGACTTTCGCGGC GGCGATCGCGCGATCGAGCGCAGCGAATATATTGCGGGCAGCGCAGCTGTGCACTCGAAGTTGCAGAAACTGGTCGCAGG CGCGCTGCGCAACGCCTGA
Upstream 100 bases:
>100_bases GGAGGGGTTAGGGGAGGGCGTGTCGAGGGACGGGCCTTTCTCGATAGGAACCGTTCCCTCCCCCGACCCCTCCCGCAAGC GGGAGGGGGGAGTAGATATC
Downstream 100 bases:
>100_bases TGTGTTCGTCATCCATCCCGGCCTTCGCCGGGATGAAGGATTTAGGCGGTTGCCCTATTCCTCGAACACATGGTCCCGAA AGCTGTCCATCAGCGACGCC
Product: inositol-1(or 4)-monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MAVSGIITVMERAARKAGTKLRRDFGEIEHLQVSQKGPADFVSKADQAAERTLYDELIHARPGWGFLMEEAGEIEGEPGK PRFIIDPLDGTSNFLHAIPHFAISIAVQEPKLGGGWGDVTAALIYQPVTDESYWAERGRGAWLHDRRLRVASRRHLNECL ISTGIPYMGHGNMAQWSRIFGAIAPEVAGIRRFGAASLDLAWVAAGRYDGFWESDLQIWDVAAGMLLVREAGGFVTDFRG GDRAIERSEYIAGSAAVHSKLQKLVAGALRNA
Sequences:
>Translated_272_residues MAVSGIITVMERAARKAGTKLRRDFGEIEHLQVSQKGPADFVSKADQAAERTLYDELIHARPGWGFLMEEAGEIEGEPGK PRFIIDPLDGTSNFLHAIPHFAISIAVQEPKLGGGWGDVTAALIYQPVTDESYWAERGRGAWLHDRRLRVASRRHLNECL ISTGIPYMGHGNMAQWSRIFGAIAPEVAGIRRFGAASLDLAWVAAGRYDGFWESDLQIWDVAAGMLLVREAGGFVTDFRG GDRAIERSEYIAGSAAVHSKLQKLVAGALRNA >Mature_271_residues AVSGIITVMERAARKAGTKLRRDFGEIEHLQVSQKGPADFVSKADQAAERTLYDELIHARPGWGFLMEEAGEIEGEPGKP RFIIDPLDGTSNFLHAIPHFAISIAVQEPKLGGGWGDVTAALIYQPVTDESYWAERGRGAWLHDRRLRVASRRHLNECLI STGIPYMGHGNMAQWSRIFGAIAPEVAGIRRFGAASLDLAWVAAGRYDGFWESDLQIWDVAAGMLLVREAGGFVTDFRGG DRAIERSEYIAGSAAVHSKLQKLVAGALRNA
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=269, Percent_Identity=31.2267657992565, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI5031789, Length=215, Percent_Identity=30.6976744186047, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI221625487, Length=215, Percent_Identity=30.6976744186047, Blast_Score=114, Evalue=8e-26, Organism=Homo sapiens, GI221625507, Length=123, Percent_Identity=31.7073170731707, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1788882, Length=252, Percent_Identity=41.6666666666667, Blast_Score=200, Evalue=7e-53, Organism=Caenorhabditis elegans, GI193202572, Length=251, Percent_Identity=32.2709163346614, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI193202570, Length=255, Percent_Identity=32.5490196078431, Blast_Score=120, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6320493, Length=241, Percent_Identity=27.8008298755187, Blast_Score=102, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321836, Length=256, Percent_Identity=24.21875, Blast_Score=92, Evalue=7e-20, Organism=Drosophila melanogaster, GI21357329, Length=239, Percent_Identity=31.3807531380753, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI24664926, Length=236, Percent_Identity=30.9322033898305, Blast_Score=118, Evalue=5e-27, Organism=Drosophila melanogaster, GI24664922, Length=255, Percent_Identity=27.843137254902, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24664918, Length=237, Percent_Identity=29.535864978903, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21357957, Length=268, Percent_Identity=31.3432835820896, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21357303, Length=235, Percent_Identity=29.3617021276596, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29783; Mature: 29652
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSGIITVMERAARKAGTKLRRDFGEIEHLQVSQKGPADFVSKADQAAERTLYDELIHA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC RPGWGFLMEEAGEIEGEPGKPRFIIDPLDGTSNFLHAIPHFAISIAVQEPKLGGGWGDVT CCCCCHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHH AALIYQPVTDESYWAERGRGAWLHDRRLRVASRRHLNECLISTGIPYMGHGNMAQWSRIF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GAIAPEVAGIRRFGAASLDLAWVAAGRYDGFWESDLQIWDVAAGMLLVREAGGFVTDFRG HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCC GDRAIERSEYIAGSAAVHSKLQKLVAGALRNA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVSGIITVMERAARKAGTKLRRDFGEIEHLQVSQKGPADFVSKADQAAERTLYDELIHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC RPGWGFLMEEAGEIEGEPGKPRFIIDPLDGTSNFLHAIPHFAISIAVQEPKLGGGWGDVT CCCCCHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHEEEEEEECCCCCCCHHHHH AALIYQPVTDESYWAERGRGAWLHDRRLRVASRRHLNECLISTGIPYMGHGNMAQWSRIF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GAIAPEVAGIRRFGAASLDLAWVAAGRYDGFWESDLQIWDVAAGMLLVREAGGFVTDFRG HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCC GDRAIERSEYIAGSAAVHSKLQKLVAGALRNA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]