| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is coaX
Identifier: 103486780
GI number: 103486780
Start: 1353376
End: 1354161
Strand: Reverse
Name: coaX
Synonym: Sala_1294
Alternate gene names: 103486780
Gene position: 1354161-1353376 (Counterclockwise)
Preceding gene: 103486781
Following gene: 103486779
Centisome position: 40.48
GC content: 62.85
Gene sequence:
>786_bases ATGCTGCTCGCGATCGACGTCGGCAACACCAACGCCAAATTTGCGCTGTTTCGCGGGGCCGAGCTGCTCGCGCGCTGGCG CATCGCGACCGACGACCGGCGCACCGCCGACGAATATATGGTGTGGCTCGATCAGTTGATGCGGATCGAGGGGTATGATC GCGGCGACGTCGATGCCGTGATCATCTCGACCGTGGTGCCGCGCGCGCTGCACAATCTGCAACTACTGGCTCACAAATAT TTCGGCGTCGATGCGCTGGTTGCCGGTCGCGAACCCGTCACATGGGGCATCGCATTGAAGGTTGACGAGCCGCAGTCGGT CGGCGCCGACCGCGCGGTCAATGCGATCGCGGCACAGGCGGTCGAGCCCGGCAGGGACAAACTTGTGATCAGCTTCGGCA CTGCCACGACGCTCGACCATATCGGCCCCGACGGCGCCTATCTGGGCGGCATCATTGCGCCGGGTGTCAACCTGTCGCTC GAAGCGCTCGTCGCTGCGGCCGCCAAGCTGCCGCGCATCGCGATCGAGGCGCCCGCGAGCGCCAGCGTGATCGGGCGTAC CACCGAAAGCCAGATGCTGATCGGCGTCTATTGGGGCTATGTCGCAATGATCGAAGGGCTGATAGCGCGCATGAAGGCGC AGATCGGCAAGCCGCTTGTCGTGGTCGCGACCGGCGGCCTCGCGACACTTTTTCAGGAACAGGCCCATCTGTTCGATCGT ATCGAACCCGATTTGACGCTGAACGGGCTCATGCACCTCTATAACCAAGGACAACAAAAGATATGA
Upstream 100 bases:
>100_bases GAGGATGGTGCGCTGCGCTTGCGCCGCGAGGGCGGGGAGACCATGCTGATTCATGCGGGCGACGTCGAACTTCGCCGCCC GGTGGTTGAAGGATAACGCC
Downstream 100 bases:
>100_bases CGACTCCGGGCAAGGAGCTGCTTTTTCTCGCATTGGGGGGATCGGGCGAGATCGGCATGAACGCCAATCTATATGGCTGT GACGGCAAATGGATCATGCT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MLLAIDVGNTNAKFALFRGAELLARWRIATDDRRTADEYMVWLDQLMRIEGYDRGDVDAVIISTVVPRALHNLQLLAHKY FGVDALVAGREPVTWGIALKVDEPQSVGADRAVNAIAAQAVEPGRDKLVISFGTATTLDHIGPDGAYLGGIIAPGVNLSL EALVAAAAKLPRIAIEAPASASVIGRTTESQMLIGVYWGYVAMIEGLIARMKAQIGKPLVVVATGGLATLFQEQAHLFDR IEPDLTLNGLMHLYNQGQQKI
Sequences:
>Translated_261_residues MLLAIDVGNTNAKFALFRGAELLARWRIATDDRRTADEYMVWLDQLMRIEGYDRGDVDAVIISTVVPRALHNLQLLAHKY FGVDALVAGREPVTWGIALKVDEPQSVGADRAVNAIAAQAVEPGRDKLVISFGTATTLDHIGPDGAYLGGIIAPGVNLSL EALVAAAAKLPRIAIEAPASASVIGRTTESQMLIGVYWGYVAMIEGLIARMKAQIGKPLVVVATGGLATLFQEQAHLFDR IEPDLTLNGLMHLYNQGQQKI >Mature_261_residues MLLAIDVGNTNAKFALFRGAELLARWRIATDDRRTADEYMVWLDQLMRIEGYDRGDVDAVIISTVVPRALHNLQLLAHKY FGVDALVAGREPVTWGIALKVDEPQSVGADRAVNAIAAQAVEPGRDKLVISFGTATTLDHIGPDGAYLGGIIAPGVNLSL EALVAAAAKLPRIAIEAPASASVIGRTTESQMLIGVYWGYVAMIEGLIARMKAQIGKPLVVVATGGLATLFQEQAHLFDR IEPDLTLNGLMHLYNQGQQKI
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_SPHAL (Q1GTL4)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616341.1 - ProteinModelPortal: Q1GTL4 - SMR: Q1GTL4 - GeneID: 4082586 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1294 - NMPDR: fig|317655.9.peg.1230 - HOGENOM: HBG634537 - OMA: PAIVVDF - ProtClustDB: PRK13318 - BioCyc: SALA317655:SALA_1294-MONOMER - BRENDA: 2.7.1.33 - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 28093; Mature: 28093
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: ACT_SITE 110-110 BINDING 134-134 BINDING 188-188
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAIDVGNTNAKFALFRGAELLARWRIATDDRRTADEYMVWLDQLMRIEGYDRGDVDAV CEEEEEECCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH IISTVVPRALHNLQLLAHKYFGVDALVAGREPVTWGIALKVDEPQSVGADRAVNAIAAQA HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCHHCCHHHHHHHHHHHH VEPGRDKLVISFGTATTLDHIGPDGAYLGGIIAPGVNLSLEALVAAAAKLPRIAIEAPAS CCCCCCEEEEEECCCHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHHHCCEEEEECCCC ASVIGRTTESQMLIGVYWGYVAMIEGLIARMKAQIGKPLVVVATGGLATLFQEQAHLFDR CCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH IEPDLTLNGLMHLYNQGQQKI CCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLAIDVGNTNAKFALFRGAELLARWRIATDDRRTADEYMVWLDQLMRIEGYDRGDVDAV CEEEEEECCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHH IISTVVPRALHNLQLLAHKYFGVDALVAGREPVTWGIALKVDEPQSVGADRAVNAIAAQA HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCHHCCHHHHHHHHHHHH VEPGRDKLVISFGTATTLDHIGPDGAYLGGIIAPGVNLSLEALVAAAAKLPRIAIEAPAS CCCCCCEEEEEECCCHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHHHCCEEEEECCCC ASVIGRTTESQMLIGVYWGYVAMIEGLIARMKAQIGKPLVVVATGGLATLFQEQAHLFDR CCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH IEPDLTLNGLMHLYNQGQQKI CCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA