| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nasA [H]
Identifier: 103486754
GI number: 103486754
Start: 1322376
End: 1325030
Strand: Direct
Name: nasA [H]
Synonym: Sala_1268
Alternate gene names: 103486754
Gene position: 1322376-1325030 (Clockwise)
Preceding gene: 103486753
Following gene: 103486755
Centisome position: 39.53
GC content: 68.06
Gene sequence:
>2655_bases GTGCCCCGCACGGTTGAGGATCGTCCGGGGGACGATCCGACCCGGCGCCCCCCTGAAGGGGAGAGGGCTATAAGGACCAC CTGCGCCTATTGCGGCGTCGGCTGCGGCATAAGCGCAACGGTGACCGGCGAACGCACGGTCGATATCGCAGGCGACCCCG ACCATCCCGCCAACCGCGGCAAACTCTGTTCCAAGGGCACGCACCTCGGCGAAACGGTCGGGCTCGAAGGCCGCCTTCTC CATCCGATGATCGGCAACAAGCGCGCCAGCTGGGACAAGGCGCTCGACCTCGTCGCCAAGCGCTTCAAGGAGGTGATCGC GCGCCATGGTCCGAACAGCGTCGCCTTCTATGTGTCGGGCCAGCTCCTGACCGAGGATTATTATGTCGCGAACAAGCTGA TGAAGGGCTTCATCGGCACCGCCAACATCGACACCAACTCAAGGCTGTGCATGTCGAGCGCGGTCGCCGGGCACATGCGC GCGTTCGGCGAGGACGTCGTTCCCGCGACCTATGCCGACCTCGACGCGGCCGACCTGTTCATCCTTGTCGGATCGAACAC CGCCTGGTGCCATCCGGTCGTTTATCAGCGCATCCGCGCCCGCTGCGAGGCGGGAGCCAAGCTCGTCGTCATCGACCCGC GCCGCACCGAAACCGCTGAGGAAGCCGATCTTCACCTCGCGATTCGCCCCGGCAGCGACGTGGCGCTGATGAACGGCCTG CTCCAGTACAGCCGCGAGGCGGGCGCGATCGACGAGGCTTATCTTGCCGCGCATGTCGCGGTGCCAGAGGATTTCTGGGA CAGGCTTGGAGAGGGGAATGACCTGTGGTCGGTGGCGCGCATCTGCGATGTTGCCGCCGCCGACCTCAGGCATTTCTACG ACCTCTTCGCAGCGACCCCGCGCGCCGTCACCCTGTTCAGCCAGGGGATAAACCAGTCGACCGCGGGCACCGACCAGGTG AATGCGATCCTCAACCTCCACCTCGCAACCGGGCGCATCGGCAAGCCGGGCGCCGCCCCCTTTTCGATCACCGGCCAGCC CAATGCGATGGGCGGGCGCGAAGTCGGCGGTCTCGCGTCGACGCTCGCCGCGCACATGGATTTCGGACAGGAAAACCGCG CGCGCGTCCAGCGCTTCTGGGCGGCGCCGACAATGGCCGAAAAGCCGGGCCTGAAAGCCGTCGACATGTTCCGCGCGATC GGCGAGGGGCGGATCAGGGCGCTGTGGGTGATGGCGACCAATCCGGCGGTGTCGATGCCCGACGCGGGCCGCGTGCGCGA GGCGCTCGCCGCCTGCCCCTTTGTCGTCGTCAGCGACGTCATGGAAAAGACCGATACCGGCGCCTTCGCGCACGTCCGCC TGCCCGCCGCCGCCTGGGGCGAAAAGGACGGCACCGTCACGGGCAGCGACCGCACGATCAGCCGCCAGCGCGCACTTTTC GCGCTTCCCGGCGAAGCGATGCCCGACTGGTGGATCGTCAAGGAAGTCGCGCGGCGCATGGGCTGGAAAAACGCCTTCAC CTACGACCGCCCCGCCGACATCTGGCGCGAGCATTGCCGTCTGTCGAATTATGACAATGACGGTGCGCGCATCTTTTCCC TGCCGGGTGCGGCACTGGGCGGCAATGGAGCCTATGATGCCATGGAGCCTTTTCGCTGGGGCGGCGATCATCCGTTCGCC GAGGGGCGGTTCCCGACCGAAGACGGCCGGGCGCGCCTCGTCCCCGTTGCGCAAAGGCCGCTGCCGGAACCGCTCGCCAA ATGGCCCCTCACACTGAACACCGGCCGCTACCGCGACCAGTGGCATACGATGACGCGCACCGGACTCGCTCCAAAGCTGG CACGTCACCGCGAGGAGCCGCTCGTCGAGGTCCACCCCGACGACGGTACGCGACTCGGCCTTACCGACGGTGGCCTTGCG CACGTGGAAACGCCGCAGGGCGACAGCCTCTACCGCGTCGCGTTCCACGATGGCCAGCGCCCCGGCGAGATCTTTGTTCC GATCCACTGGACCGACCGCACCAGCAGCGGCGGCCGCACCGGCCTGCTCCCGCGCCCGCTCGTCGACCCTCTCTCGGGCC AGCCGGGTTTCAAGCGCACCCCCGCCGCCATCGCTCCGGTCCAGACGAGATGGCGCGCCTTCCTGCTGCTCGCACGCGAA CTGGCAACCACGCCGCGCTGCCTGTGGGCGACGCGCGTCGCGGTGCCAGCGGGCGTGCTGTGGGAACTGGCAGGCAATGG CGATCTCAAGGCAATCGAGGCGCTTCTGCCCAAGGGCGAACATATTGAAGCGCACGACGCTGCACGCGGGACGCGGCGTA TCGCCATCGTCGCGAACGGCCGTCTCGCGGGCGCGCTGTTCGCGACCGAAACCGGCAATCTGCCCCCCCGCGACTGGTTG ATCGCACAACTTGCCGCGCCCGAAATCGCCCCCACGCTGCTCGCCGGTCGCGCGCCGGGCGTACAGGCCGACCGCGGGCC GATCGTCTGCGTCTGTTTCGACATCGGGCTCAGAACGATCGTCGCCGCGATCCGCGACCAGAACCTCGCCGATGTTGCGG CGATCGGCGCTGCGCTGGGCGCGGGCACCAACTGCGGGTCGTGCCGCCCCGCGCTTGCCCGTATTCTGACCGAGGAGACC AGCAATGCAGCCTGA
Upstream 100 bases:
>100_bases ATCACCCTCTCCCCTTCAGGGGAGAGGGCCGGGGAGAGGGGAGCGACAGTTGAGCGCTTCCCTGCCCCCGCCCCCTCTCC CAACCGGTGCCGGGTCAACC
Downstream 100 bases:
>100_bases TGATTTCGCCCCCGGCACGGTTTGGCTCGTCGGTGCAGGCCCCGGCGATCCCGACCTGCTGACGATGAAGGCCGTGCGAT TGATCAGCCGCGCCGATATC
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 883
Protein sequence:
>884_residues MPRTVEDRPGDDPTRRPPEGERAIRTTCAYCGVGCGISATVTGERTVDIAGDPDHPANRGKLCSKGTHLGETVGLEGRLL HPMIGNKRASWDKALDLVAKRFKEVIARHGPNSVAFYVSGQLLTEDYYVANKLMKGFIGTANIDTNSRLCMSSAVAGHMR AFGEDVVPATYADLDAADLFILVGSNTAWCHPVVYQRIRARCEAGAKLVVIDPRRTETAEEADLHLAIRPGSDVALMNGL LQYSREAGAIDEAYLAAHVAVPEDFWDRLGEGNDLWSVARICDVAAADLRHFYDLFAATPRAVTLFSQGINQSTAGTDQV NAILNLHLATGRIGKPGAAPFSITGQPNAMGGREVGGLASTLAAHMDFGQENRARVQRFWAAPTMAEKPGLKAVDMFRAI GEGRIRALWVMATNPAVSMPDAGRVREALAACPFVVVSDVMEKTDTGAFAHVRLPAAAWGEKDGTVTGSDRTISRQRALF ALPGEAMPDWWIVKEVARRMGWKNAFTYDRPADIWREHCRLSNYDNDGARIFSLPGAALGGNGAYDAMEPFRWGGDHPFA EGRFPTEDGRARLVPVAQRPLPEPLAKWPLTLNTGRYRDQWHTMTRTGLAPKLARHREEPLVEVHPDDGTRLGLTDGGLA HVETPQGDSLYRVAFHDGQRPGEIFVPIHWTDRTSSGGRTGLLPRPLVDPLSGQPGFKRTPAAIAPVQTRWRAFLLLARE LATTPRCLWATRVAVPAGVLWELAGNGDLKAIEALLPKGEHIEAHDAARGTRRIAIVANGRLAGALFATETGNLPPRDWL IAQLAAPEIAPTLLAGRAPGVQADRGPIVCVCFDIGLRTIVAAIRDQNLADVAAIGAALGAGTNCGSCRPALARILTEET SNAA
Sequences:
>Translated_884_residues MPRTVEDRPGDDPTRRPPEGERAIRTTCAYCGVGCGISATVTGERTVDIAGDPDHPANRGKLCSKGTHLGETVGLEGRLL HPMIGNKRASWDKALDLVAKRFKEVIARHGPNSVAFYVSGQLLTEDYYVANKLMKGFIGTANIDTNSRLCMSSAVAGHMR AFGEDVVPATYADLDAADLFILVGSNTAWCHPVVYQRIRARCEAGAKLVVIDPRRTETAEEADLHLAIRPGSDVALMNGL LQYSREAGAIDEAYLAAHVAVPEDFWDRLGEGNDLWSVARICDVAAADLRHFYDLFAATPRAVTLFSQGINQSTAGTDQV NAILNLHLATGRIGKPGAAPFSITGQPNAMGGREVGGLASTLAAHMDFGQENRARVQRFWAAPTMAEKPGLKAVDMFRAI GEGRIRALWVMATNPAVSMPDAGRVREALAACPFVVVSDVMEKTDTGAFAHVRLPAAAWGEKDGTVTGSDRTISRQRALF ALPGEAMPDWWIVKEVARRMGWKNAFTYDRPADIWREHCRLSNYDNDGARIFSLPGAALGGNGAYDAMEPFRWGGDHPFA EGRFPTEDGRARLVPVAQRPLPEPLAKWPLTLNTGRYRDQWHTMTRTGLAPKLARHREEPLVEVHPDDGTRLGLTDGGLA HVETPQGDSLYRVAFHDGQRPGEIFVPIHWTDRTSSGGRTGLLPRPLVDPLSGQPGFKRTPAAIAPVQTRWRAFLLLARE LATTPRCLWATRVAVPAGVLWELAGNGDLKAIEALLPKGEHIEAHDAARGTRRIAIVANGRLAGALFATETGNLPPRDWL IAQLAAPEIAPTLLAGRAPGVQADRGPIVCVCFDIGLRTIVAAIRDQNLADVAAIGAALGAGTNCGSCRPALARILTEET SNAA >Mature_883_residues PRTVEDRPGDDPTRRPPEGERAIRTTCAYCGVGCGISATVTGERTVDIAGDPDHPANRGKLCSKGTHLGETVGLEGRLLH PMIGNKRASWDKALDLVAKRFKEVIARHGPNSVAFYVSGQLLTEDYYVANKLMKGFIGTANIDTNSRLCMSSAVAGHMRA FGEDVVPATYADLDAADLFILVGSNTAWCHPVVYQRIRARCEAGAKLVVIDPRRTETAEEADLHLAIRPGSDVALMNGLL QYSREAGAIDEAYLAAHVAVPEDFWDRLGEGNDLWSVARICDVAAADLRHFYDLFAATPRAVTLFSQGINQSTAGTDQVN AILNLHLATGRIGKPGAAPFSITGQPNAMGGREVGGLASTLAAHMDFGQENRARVQRFWAAPTMAEKPGLKAVDMFRAIG EGRIRALWVMATNPAVSMPDAGRVREALAACPFVVVSDVMEKTDTGAFAHVRLPAAAWGEKDGTVTGSDRTISRQRALFA LPGEAMPDWWIVKEVARRMGWKNAFTYDRPADIWREHCRLSNYDNDGARIFSLPGAALGGNGAYDAMEPFRWGGDHPFAE GRFPTEDGRARLVPVAQRPLPEPLAKWPLTLNTGRYRDQWHTMTRTGLAPKLARHREEPLVEVHPDDGTRLGLTDGGLAH VETPQGDSLYRVAFHDGQRPGEIFVPIHWTDRTSSGGRTGLLPRPLVDPLSGQPGFKRTPAAIAPVQTRWRAFLLLAREL ATTPRCLWATRVAVPAGVLWELAGNGDLKAIEALLPKGEHIEAHDAARGTRRIAIVANGRLAGALFATETGNLPPRDWLI AQLAAPEIAPTLLAGRAPGVQADRGPIVCVCFDIGLRTIVAAIRDQNLADVAAIGAALGAGTNCGSCRPALARILTEETS NAA
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI3868721, Length=702, Percent_Identity=27.6353276353276, Blast_Score=269, Evalue=5e-73, Organism=Escherichia coli, GI1788534, Length=529, Percent_Identity=31.758034026465, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI3868720, Length=619, Percent_Identity=25.0403877221325, Blast_Score=159, Evalue=6e-40, Organism=Escherichia coli, GI3868719, Length=608, Percent_Identity=24.3421052631579, Blast_Score=158, Evalue=2e-39, Organism=Escherichia coli, GI1787778, Length=391, Percent_Identity=28.1329923273657, Blast_Score=114, Evalue=4e-26, Organism=Escherichia coli, GI1787870, Length=717, Percent_Identity=22.4546722454672, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87081797, Length=556, Percent_Identity=23.021582733813, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI171474008, Length=561, Percent_Identity=21.9251336898396, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI145693196, Length=668, Percent_Identity=22.4550898203593, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 95326; Mature: 95195
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTVEDRPGDDPTRRPPEGERAIRTTCAYCGVGCGISATVTGERTVDIAGDPDHPANRG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCC KLCSKGTHLGETVGLEGRLLHPMIGNKRASWDKALDLVAKRFKEVIARHGPNSVAFYVSG CCCCCCCCCCHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC QLLTEDYYVANKLMKGFIGTANIDTNSRLCMSSAVAGHMRAFGEDVVPATYADLDAADLF EEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEE ILVGSNTAWCHPVVYQRIRARCEAGAKLVVIDPRRTETAEEADLHLAIRPGSDVALMNGL EEECCCCCEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH LQYSREAGAIDEAYLAAHVAVPEDFWDRLGEGNDLWSVARICDVAAADLRHFYDLFAATP HHHHHHCCCCHHHHHHEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RAVTLFSQGINQSTAGTDQVNAILNLHLATGRIGKPGAAPFSITGQPNAMGGREVGGLAS HHHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHH TLAAHMDFGQENRARVQRFWAAPTMAEKPGLKAVDMFRAIGEGRIRALWVMATNPAVSMP HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC DAGRVREALAACPFVVVSDVMEKTDTGAFAHVRLPAAAWGEKDGTVTGSDRTISRQRALF CCHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCEECCCCCCHHHCCEEE ALPGEAMPDWWIVKEVARRMGWKNAFTYDRPADIWREHCRLSNYDNDGARIFSLPGAALG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC GNGAYDAMEPFRWGGDHPFAEGRFPTEDGRARLVPVAQRPLPEPLAKWPLTLNTGRYRDQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCEEECCCCCHHH WHTMTRTGLAPKLARHREEPLVEVHPDDGTRLGLTDGGLAHVETPQGDSLYRVAFHDGQR HHHHHHHCCCHHHHHHCCCCEEEECCCCCCEECCCCCCEEEEECCCCCCEEEEEEECCCC PGEIFVPIHWTDRTSSGGRTGLLPRPLVDPLSGQPGFKRTPAAIAPVQTRWRAFLLLARE CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH LATTPRCLWATRVAVPAGVLWELAGNGDLKAIEALLPKGEHIEAHDAARGTRRIAIVANG HHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECC RLAGALFATETGNLPPRDWLIAQLAAPEIAPTLLAGRAPGVQADRGPIVCVCFDIGLRTI CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHH VAAIRDQNLADVAAIGAALGAGTNCGSCRPALARILTEETSNAA HHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure PRTVEDRPGDDPTRRPPEGERAIRTTCAYCGVGCGISATVTGERTVDIAGDPDHPANRG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEEECCCCCCCCCCC KLCSKGTHLGETVGLEGRLLHPMIGNKRASWDKALDLVAKRFKEVIARHGPNSVAFYVSG CCCCCCCCCCHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC QLLTEDYYVANKLMKGFIGTANIDTNSRLCMSSAVAGHMRAFGEDVVPATYADLDAADLF EEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEE ILVGSNTAWCHPVVYQRIRARCEAGAKLVVIDPRRTETAEEADLHLAIRPGSDVALMNGL EEECCCCCEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHH LQYSREAGAIDEAYLAAHVAVPEDFWDRLGEGNDLWSVARICDVAAADLRHFYDLFAATP HHHHHHCCCCHHHHHHEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RAVTLFSQGINQSTAGTDQVNAILNLHLATGRIGKPGAAPFSITGQPNAMGGREVGGLAS HHHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHH TLAAHMDFGQENRARVQRFWAAPTMAEKPGLKAVDMFRAIGEGRIRALWVMATNPAVSMP HHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC DAGRVREALAACPFVVVSDVMEKTDTGAFAHVRLPAAAWGEKDGTVTGSDRTISRQRALF CCHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCEECCCCCCHHHCCEEE ALPGEAMPDWWIVKEVARRMGWKNAFTYDRPADIWREHCRLSNYDNDGARIFSLPGAALG ECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCC GNGAYDAMEPFRWGGDHPFAEGRFPTEDGRARLVPVAQRPLPEPLAKWPLTLNTGRYRDQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHCCEEECCCCCHHH WHTMTRTGLAPKLARHREEPLVEVHPDDGTRLGLTDGGLAHVETPQGDSLYRVAFHDGQR HHHHHHHCCCHHHHHHCCCCEEEECCCCCCEECCCCCCEEEEECCCCCCEEEEEEECCCC PGEIFVPIHWTDRTSSGGRTGLLPRPLVDPLSGQPGFKRTPAAIAPVQTRWRAFLLLARE CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHH LATTPRCLWATRVAVPAGVLWELAGNGDLKAIEALLPKGEHIEAHDAARGTRRIAIVANG HHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECC RLAGALFATETGNLPPRDWLIAQLAAPEIAPTLLAGRAPGVQADRGPIVCVCFDIGLRTI CEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHH VAAIRDQNLADVAAIGAALGAGTNCGSCRPALARILTEETSNAA HHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]