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The map label for this gene is 103486705

Identifier: 103486705

GI number: 103486705

Start: 1259412

End: 1260899

Strand: Reverse

Name: 103486705

Synonym: Sala_1217

Alternate gene names: NA

Gene position: 1260899-1259412 (Counterclockwise)

Preceding gene: 103486712

Following gene: 103486702

Centisome position: 37.69

GC content: 67.54

Gene sequence:

>1488_bases
TTGCCCGGATACAGGCCGAGAGGCAAATGCGAATTTGCAAAGTTGCAAAGCGATGCTTTGCAAACTATGCTGCCACCGAT
GGTTCAAAACCGACTCTACGCCGGGCGGCAACTTCGCCAACTTCGGGAAGCCCGCAACCTCCGCCAGTCCGACTTCGCCG
CCCAGCTCGGCATCTCGGCCTCCTACCTCAGCCAGATCGAGCATGACGACCGCCCGCTGACCCCCGCCCTTCTCGACCGG
CTGCAAAAGCTGTTCCCGCTCGAATGGGAAGAAGTCGCCGCCGACGCCGGCGACCGCCGCGCGGCAGCGCTCCGCGAAGC
CGCCGCCGATCCGCTGTTCGCCGCAGCGCCCCTGCCCCCCGAGCAGATCGAACGCGCGGCGCTGCAACAACCGCAGTTCG
CCGACCAGTTCGTTGCGCTCCACGCCGCCTATCGCCGTGCGGGGCAGCGGCTTCAGATCATCGACGAGGCGCTGACCGGC
GGCATCGCCGAAGGCAGCCGCCTGCCGTGGGAAGAAGTGCGCGACTGGTTCCACGACGCGGGCAATTATGTCGACAGCAT
CGACCGCGCGGCAGAGGCATTGGCGGAGCAATTGCGCGGCAAAGCCCCCTCCCCCGCGATCGAGACGATCGAACGCCGGC
TGCGCGATGCGCTCGGCATCTCGATCGTCTATCAGCAAACCCAAGCCTTGCGCGATTTCGACGCGACGATGCGCCATTTG
GTGATCGACCCGTCACAGCCTGCCGAAAGCCGCCGATTTCAGCTCGCGCACCAGCTTGCCGCACTGGCGCTGGCGCGCGA
GATCGCGGCGGTGGTCGAAGCGTCGCCGCTTCGCACCGCGGCGGCGCGGCAACTGCTCCACGTCGGCCTCGCCAACTATG
CCGCGGGCGCCGTCCTCATGCCCTATGCCCCCTTTCGCGCCAGCGCGCGGGCGGTGCGCCACGACATCGACCGGCTGCGG
CTCGAATATGGCGTGAGTTTCGAGCAGGCGTGCCACCGCCTCTCGACGCTCCAGCGCCCCGGCGCGCGCGGCATTCCCAT
GTTCTTCTGCCGCGTCGACATGGCGGGCAACATCACCAAGCGCCACAGCGCGACGCGGTTGCAATTCGCGCGTTTCGGCG
GCGCCTGTCCCTTGTGGATCGTCCATGAGGCGGTCGCGATCCCCGATCGCATCCTGTTCCAGCTCGCCGAGACGCCCGAC
GGCCTGCGCTATGTGTCGATGGCAAAGGGCTTGGTGAAGCCGTCGGGAAGCTATGCCCGCGCGCCTCGTCGCTACGCGGT
CGCACTGGGGTGCGAGGCGCAATATGCAGGCGACTTTGTCTATGCCGACGGAGTCGATGTCGCCGCGCCCCAGGCCGCGA
CGCGCATCGGCCTGTCGTGCCGCATCTGCCCGCGCGACGATTGCGACCAGCGCGCCTTCCCGCCAAGCGACCGGCCGATT
TTGGTCGATCCCGATCGGCGCGATGTGGTGCCGTACCGGATTGGATGA

Upstream 100 bases:

>100_bases
GCGCTTCTGCCCGCCGCCCAGCGCAGCGGCGGCGCGGCGGCGTTCCATTTCGGCGATATTGGCGGACATGCGGCTCTCCC
AACGAACTTCAGAATGTCGC

Downstream 100 bases:

>100_bases
CGATTGGCGTCGCCCCCGCCTGCGCGGGGGCGACGTTGTAACACTATTTCAACAACACCAGCTCTTCGGCCATGCTCGGA
TGCAGCGCGACCGTCGCGTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MPGYRPRGKCEFAKLQSDALQTMLPPMVQNRLYAGRQLRQLREARNLRQSDFAAQLGISASYLSQIEHDDRPLTPALLDR
LQKLFPLEWEEVAADAGDRRAAALREAAADPLFAAAPLPPEQIERAALQQPQFADQFVALHAAYRRAGQRLQIIDEALTG
GIAEGSRLPWEEVRDWFHDAGNYVDSIDRAAEALAEQLRGKAPSPAIETIERRLRDALGISIVYQQTQALRDFDATMRHL
VIDPSQPAESRRFQLAHQLAALALAREIAAVVEASPLRTAAARQLLHVGLANYAAGAVLMPYAPFRASARAVRHDIDRLR
LEYGVSFEQACHRLSTLQRPGARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWIVHEAVAIPDRILFQLAETPD
GLRYVSMAKGLVKPSGSYARAPRRYAVALGCEAQYAGDFVYADGVDVAAPQAATRIGLSCRICPRDDCDQRAFPPSDRPI
LVDPDRRDVVPYRIG

Sequences:

>Translated_495_residues
MPGYRPRGKCEFAKLQSDALQTMLPPMVQNRLYAGRQLRQLREARNLRQSDFAAQLGISASYLSQIEHDDRPLTPALLDR
LQKLFPLEWEEVAADAGDRRAAALREAAADPLFAAAPLPPEQIERAALQQPQFADQFVALHAAYRRAGQRLQIIDEALTG
GIAEGSRLPWEEVRDWFHDAGNYVDSIDRAAEALAEQLRGKAPSPAIETIERRLRDALGISIVYQQTQALRDFDATMRHL
VIDPSQPAESRRFQLAHQLAALALAREIAAVVEASPLRTAAARQLLHVGLANYAAGAVLMPYAPFRASARAVRHDIDRLR
LEYGVSFEQACHRLSTLQRPGARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWIVHEAVAIPDRILFQLAETPD
GLRYVSMAKGLVKPSGSYARAPRRYAVALGCEAQYAGDFVYADGVDVAAPQAATRIGLSCRICPRDDCDQRAFPPSDRPI
LVDPDRRDVVPYRIG
>Mature_494_residues
PGYRPRGKCEFAKLQSDALQTMLPPMVQNRLYAGRQLRQLREARNLRQSDFAAQLGISASYLSQIEHDDRPLTPALLDRL
QKLFPLEWEEVAADAGDRRAAALREAAADPLFAAAPLPPEQIERAALQQPQFADQFVALHAAYRRAGQRLQIIDEALTGG
IAEGSRLPWEEVRDWFHDAGNYVDSIDRAAEALAEQLRGKAPSPAIETIERRLRDALGISIVYQQTQALRDFDATMRHLV
IDPSQPAESRRFQLAHQLAALALAREIAAVVEASPLRTAAARQLLHVGLANYAAGAVLMPYAPFRASARAVRHDIDRLRL
EYGVSFEQACHRLSTLQRPGARGIPMFFCRVDMAGNITKRHSATRLQFARFGGACPLWIVHEAVAIPDRILFQLAETPDG
LRYVSMAKGLVKPSGSYARAPRRYAVALGCEAQYAGDFVYADGVDVAAPQAATRIGLSCRICPRDDCDQRAFPPSDRPIL
VDPDRRDVVPYRIG

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 54869; Mature: 54738

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGYRPRGKCEFAKLQSDALQTMLPPMVQNRLYAGRQLRQLREARNLRQSDFAAQLGISA
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
SYLSQIEHDDRPLTPALLDRLQKLFPLEWEEVAADAGDRRAAALREAAADPLFAAAPLPP
HHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCH
EQIERAALQQPQFADQFVALHAAYRRAGQRLQIIDEALTGGIAEGSRLPWEEVRDWFHDA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GNYVDSIDRAAEALAEQLRGKAPSPAIETIERRLRDALGISIVYQQTQALRDFDATMRHL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VIDPSQPAESRRFQLAHQLAALALAREIAAVVEASPLRTAAARQLLHVGLANYAAGAVLM
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEE
PYAPFRASARAVRHDIDRLRLEYGVSFEQACHRLSTLQRPGARGIPMFFCRVDMAGNITK
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHH
RHSATRLQFARFGGACPLWIVHEAVAIPDRILFQLAETPDGLRYVSMAKGLVKPSGSYAR
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHC
APRRYAVALGCEAQYAGDFVYADGVDVAAPQAATRIGLSCRICPRDDCDQRAFPPSDRPI
CCCCEEEEECCCHHHCCCEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCE
LVDPDRRDVVPYRIG
EECCCCCCCCCCCCC
>Mature Secondary Structure 
PGYRPRGKCEFAKLQSDALQTMLPPMVQNRLYAGRQLRQLREARNLRQSDFAAQLGISA
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCH
SYLSQIEHDDRPLTPALLDRLQKLFPLEWEEVAADAGDRRAAALREAAADPLFAAAPLPP
HHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCH
EQIERAALQQPQFADQFVALHAAYRRAGQRLQIIDEALTGGIAEGSRLPWEEVRDWFHDA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GNYVDSIDRAAEALAEQLRGKAPSPAIETIERRLRDALGISIVYQQTQALRDFDATMRHL
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
VIDPSQPAESRRFQLAHQLAALALAREIAAVVEASPLRTAAARQLLHVGLANYAAGAVLM
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEE
PYAPFRASARAVRHDIDRLRLEYGVSFEQACHRLSTLQRPGARGIPMFFCRVDMAGNITK
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHH
RHSATRLQFARFGGACPLWIVHEAVAIPDRILFQLAETPDGLRYVSMAKGLVKPSGSYAR
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHC
APRRYAVALGCEAQYAGDFVYADGVDVAAPQAATRIGLSCRICPRDDCDQRAFPPSDRPI
CCCCEEEEECCCHHHCCCEEEECCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCE
LVDPDRRDVVPYRIG
EECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]