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The map label for this gene is frc [H]

Identifier: 103486683

GI number: 103486683

Start: 1234974

End: 1236143

Strand: Reverse

Name: frc [H]

Synonym: Sala_1195

Alternate gene names: 103486683

Gene position: 1236143-1234974 (Counterclockwise)

Preceding gene: 103486684

Following gene: 103486682

Centisome position: 36.95

GC content: 64.36

Gene sequence:

>1170_bases
ATGTCCATGCTGTCCGGCATTCGCATCATCGACCTGACGACGGTTATTTTCGGCCCCTATGCGACGCAGATGCTCGCCGA
CCTGGGGGCCGAGGTCATCAAGGTCGAGACACCGGGAGCGGGTGACATCTCGCGTTACCTTGGCAGCGGCATTCCTGACC
CGACGATGGGGTCGATCCACCTCACGGTGAACCGCGGCAAAAGGTCGATCGCGCTCGACCTGAAACAGGCAGAGGACGCG
GCGGTGCTGCGCGATCTCGTCGCCACCGCCGACGTGTTTTTCCACAATATCCGCGGCAAGGCGATCGCCAAGCTGGGGTT
CGACTATGCCGCGTGCCGCGCGCTCAAGCCGGATATCATCTATGTCCATGGCACGGGCTTCGGACAGGACGGCCCCTATG
CCGACCTTCAGGCCTATGACGATGTCATCCAGGCTGCGAGCGGCACCACCAGCCTGCTCCCGCGCGTCGATGGCGACCCG
CGCCCGCGCTATTTCCCGTCGCTGATCGCCGACAAGATCGCGGGCCAGTTCGGCGCGCAGGCGATCCTGGCGGCGCTGGT
TCACAAGCTGCGGACCGGCGAGGGGCAGGCGGTCGAGGTGCCGATGTTCGAATGTTTCACTGCCTTCATGCTCACCGAAC
ATTTGCGCGATGCGACGCTCGACCCGCCGCTCGGCCCCGCGGGTTATCCGCGCCAGCTCGATCCGACCCGCCAGCCCTTC
CCGACACGCGATGGCTATGTCGCAATCGTCCCCTATACACCCGAATCGACCGTGCGCCTGATGACGCTGCTCGACAGCGA
CGCCTTGCTCGAAACCCCCGAATATGCAGCGGCAAAGGCCGAGGGTCGGCATATGCCGCTCATCTATGCCGAAATCGCGC
GCAAAACGCCGACAAAGACCACCGCCGAATGGCTGGCGATCTTTGCCGCCAACGATATTCCGGCGATGGCGGCGCGCGAT
CTGCAGCATGTCAGGGAAGATCCCCATTTCGAAGCGACAGGCTTTTTCCGGCGCCGCACCCATCCCGACGTCGGCGGCTT
TCACGAGATGCAGCCACCCGTCCGCTATGGCGCGATGGGGCCACGCGACCTGGGTTTTGCGCCACGGCTCGACGGTGATG
GCGTGGCCATCCGGGCCGAACTGTCGCAGGCGAAGGATTGCGTTGCATAA

Upstream 100 bases:

>100_bases
ACCGCAGCCGCCTGAATGGCGATGGCAAAAGCCTCTTCCGTTTCACTTTGCAATGCGTCTATCGTGCGCGACGACAAGAG
GGAGACAAGAGGGAGGCGCC

Downstream 100 bases:

>100_bases
CGGCGCGCGGCGCGTAGCATCGCGGCACAATATGGAGGGGGGAAACCATGTCGGACAGTCTACTCGCACCCGGCGCCGTC
CTGGCGCTCTGGACGATCAT

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSMLSGIRIIDLTTVIFGPYATQMLADLGAEVIKVETPGAGDISRYLGSGIPDPTMGSIHLTVNRGKRSIALDLKQAEDA
AVLRDLVATADVFFHNIRGKAIAKLGFDYAACRALKPDIIYVHGTGFGQDGPYADLQAYDDVIQAASGTTSLLPRVDGDP
RPRYFPSLIADKIAGQFGAQAILAALVHKLRTGEGQAVEVPMFECFTAFMLTEHLRDATLDPPLGPAGYPRQLDPTRQPF
PTRDGYVAIVPYTPESTVRLMTLLDSDALLETPEYAAAKAEGRHMPLIYAEIARKTPTKTTAEWLAIFAANDIPAMAARD
LQHVREDPHFEATGFFRRRTHPDVGGFHEMQPPVRYGAMGPRDLGFAPRLDGDGVAIRAELSQAKDCVA

Sequences:

>Translated_389_residues
MSMLSGIRIIDLTTVIFGPYATQMLADLGAEVIKVETPGAGDISRYLGSGIPDPTMGSIHLTVNRGKRSIALDLKQAEDA
AVLRDLVATADVFFHNIRGKAIAKLGFDYAACRALKPDIIYVHGTGFGQDGPYADLQAYDDVIQAASGTTSLLPRVDGDP
RPRYFPSLIADKIAGQFGAQAILAALVHKLRTGEGQAVEVPMFECFTAFMLTEHLRDATLDPPLGPAGYPRQLDPTRQPF
PTRDGYVAIVPYTPESTVRLMTLLDSDALLETPEYAAAKAEGRHMPLIYAEIARKTPTKTTAEWLAIFAANDIPAMAARD
LQHVREDPHFEATGFFRRRTHPDVGGFHEMQPPVRYGAMGPRDLGFAPRLDGDGVAIRAELSQAKDCVA
>Mature_388_residues
SMLSGIRIIDLTTVIFGPYATQMLADLGAEVIKVETPGAGDISRYLGSGIPDPTMGSIHLTVNRGKRSIALDLKQAEDAA
VLRDLVATADVFFHNIRGKAIAKLGFDYAACRALKPDIIYVHGTGFGQDGPYADLQAYDDVIQAASGTTSLLPRVDGDPR
PRYFPSLIADKIAGQFGAQAILAALVHKLRTGEGQAVEVPMFECFTAFMLTEHLRDATLDPPLGPAGYPRQLDPTRQPFP
TRDGYVAIVPYTPESTVRLMTLLDSDALLETPEYAAAKAEGRHMPLIYAEIARKTPTKTTAEWLAIFAANDIPAMAARDL
QHVREDPHFEATGFFRRRTHPDVGGFHEMQPPVRYGAMGPRDLGFAPRLDGDGVAIRAELSQAKDCVA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=364, Percent_Identity=29.9450549450549, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI300863124, Length=335, Percent_Identity=30.1492537313433, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI300863126, Length=353, Percent_Identity=28.328611898017, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI13376042, Length=343, Percent_Identity=27.1137026239067, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI266456254, Length=350, Percent_Identity=30.5714285714286, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI42794625, Length=350, Percent_Identity=30.5714285714286, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI266458393, Length=282, Percent_Identity=31.9148936170213, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI266458397, Length=259, Percent_Identity=32.8185328185328, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI42822893, Length=146, Percent_Identity=35.6164383561644, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI266458395, Length=146, Percent_Identity=35.6164383561644, Blast_Score=84, Evalue=3e-16,
Organism=Escherichia coli, GI1788717, Length=413, Percent_Identity=29.5399515738499, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI87082093, Length=387, Percent_Identity=28.1653746770026, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1786222, Length=340, Percent_Identity=25, Blast_Score=82, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI115535051, Length=337, Percent_Identity=24.6290801186944, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32564160, Length=333, Percent_Identity=25.8258258258258, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24648431, Length=354, Percent_Identity=29.9435028248588, Blast_Score=151, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24585488, Length=343, Percent_Identity=25.3644314868805, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 42218; Mature: 42087

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLSGIRIIDLTTVIFGPYATQMLADLGAEVIKVETPGAGDISRYLGSGIPDPTMGSIH
CCCCCCCEEEEHHHHHHCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCCCEEE
LTVNRGKRSIALDLKQAEDAAVLRDLVATADVFFHNIRGKAIAKLGFDYAACRALKPDII
EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCEE
YVHGTGFGQDGPYADLQAYDDVIQAASGTTSLLPRVDGDPRPRYFPSLIADKIAGQFGAQ
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AILAALVHKLRTGEGQAVEVPMFECFTAFMLTEHLRDATLDPPLGPAGYPRQLDPTRQPF
HHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTRDGYVAIVPYTPESTVRLMTLLDSDALLETPEYAAAKAEGRHMPLIYAEIARKTPTKT
CCCCCEEEEEEECCCCCEEEEEHHCCCHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCH
TAEWLAIFAANDIPAMAARDLQHVREDPHFEATGFFRRRTHPDVGGFHEMQPPVRYGAMG
HHHHHEEHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCC
PRDLGFAPRLDGDGVAIRAELSQAKDCVA
CCCCCCCCCCCCCCEEEEEEHHHHHHCCC
>Mature Secondary Structure 
SMLSGIRIIDLTTVIFGPYATQMLADLGAEVIKVETPGAGDISRYLGSGIPDPTMGSIH
CCCCCCEEEEHHHHHHCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCCCEEE
LTVNRGKRSIALDLKQAEDAAVLRDLVATADVFFHNIRGKAIAKLGFDYAACRALKPDII
EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCEE
YVHGTGFGQDGPYADLQAYDDVIQAASGTTSLLPRVDGDPRPRYFPSLIADKIAGQFGAQ
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AILAALVHKLRTGEGQAVEVPMFECFTAFMLTEHLRDATLDPPLGPAGYPRQLDPTRQPF
HHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PTRDGYVAIVPYTPESTVRLMTLLDSDALLETPEYAAAKAEGRHMPLIYAEIARKTPTKT
CCCCCEEEEEEECCCCCEEEEEHHCCCHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCH
TAEWLAIFAANDIPAMAARDLQHVREDPHFEATGFFRRRTHPDVGGFHEMQPPVRYGAMG
HHHHHEEHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCC
PRDLGFAPRLDGDGVAIRAELSQAKDCVA
CCCCCCCCCCCCCCEEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA