| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486678
Identifier: 103486678
GI number: 103486678
Start: 1231100
End: 1231462
Strand: Direct
Name: 103486678
Synonym: Sala_1190
Alternate gene names: NA
Gene position: 1231100-1231462 (Clockwise)
Preceding gene: 103486677
Following gene: 103486679
Centisome position: 36.8
GC content: 68.32
Gene sequence:
>363_bases ATGATTCGCAAACGCGGCGCGGTCCCGGTTGTGCTGATGTTTCTCGGCGCTTGCGGCGGCGCGCCCGGCGACGAAGCGGC GGATGCGGGCAAGGCGCGGATCGAATGCGCGCTCGAAGGCGCGGAGGCCTTTGCGCCCGACTGCACGGTCGAGGAAATGA GCGGTGTGGACGGCGCGGTTCTGGTCGTCGGGCGGAGCGACGTCGGCTACCGCCGCTTGCAGATCGCCACCGACGGGCGC GGCGTCGTTTCGGCCGATGGGTCCGAGCCTGCGAAGGTGGCGATTGTTGGAGACAGGCTGATCGAAGTCGCGATCGGCAA CGACCGATACCGTCTGCCGGCAAACACCCGCGGCGCGAAGTAA
Upstream 100 bases:
>100_bases GCCCGCGCAAGGTTTCGGTGGCGCTTCAGGCCTATGCCGCGATGACGACGAGCGCCGCGCGCGGCGCGGTGCGCGACCTG TCGCAGCTGAAGGGCAAGGG
Downstream 100 bases:
>100_bases CGCGACCTTTTCAGGCGCTTCTGGTAAGGAAACGGCATGTCCGTTCCCGCCGATGCCCCTGTCCTGACCGCCGACGCGAT GCGCGCCGCCGAGGCCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MIRKRGAVPVVLMFLGACGGAPGDEAADAGKARIECALEGAEAFAPDCTVEEMSGVDGAVLVVGRSDVGYRRLQIATDGR GVVSADGSEPAKVAIVGDRLIEVAIGNDRYRLPANTRGAK
Sequences:
>Translated_120_residues MIRKRGAVPVVLMFLGACGGAPGDEAADAGKARIECALEGAEAFAPDCTVEEMSGVDGAVLVVGRSDVGYRRLQIATDGR GVVSADGSEPAKVAIVGDRLIEVAIGNDRYRLPANTRGAK >Mature_120_residues MIRKRGAVPVVLMFLGACGGAPGDEAADAGKARIECALEGAEAFAPDCTVEEMSGVDGAVLVVGRSDVGYRRLQIATDGR GVVSADGSEPAKVAIVGDRLIEVAIGNDRYRLPANTRGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12314; Mature: 12314
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKRGAVPVVLMFLGACGGAPGDEAADAGKARIECALEGAEAFAPDCTVEEMSGVDGAV CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEE LVVGRSDVGYRRLQIATDGRGVVSADGSEPAKVAIVGDRLIEVAIGNDRYRLPANTRGAK EEEECCCCCEEEEEEEECCCEEEECCCCCCEEEEEECCEEEEEEECCCEEECCCCCCCCC >Mature Secondary Structure MIRKRGAVPVVLMFLGACGGAPGDEAADAGKARIECALEGAEAFAPDCTVEEMSGVDGAV CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCCCEEE LVVGRSDVGYRRLQIATDGRGVVSADGSEPAKVAIVGDRLIEVAIGNDRYRLPANTRGAK EEEECCCCCEEEEEEEECCCEEEECCCCCCEEEEEECCEEEEEEECCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA