| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is secG [C]
Identifier: 103486659
GI number: 103486659
Start: 1206147
End: 1206611
Strand: Reverse
Name: secG [C]
Synonym: Sala_1171
Alternate gene names: 103486659
Gene position: 1206611-1206147 (Counterclockwise)
Preceding gene: 103486660
Following gene: 103486658
Centisome position: 36.07
GC content: 71.61
Gene sequence:
>465_bases ATGATGTCCAGCCTTTTCACCTTCCTGCTCGTCGTCCAGGCGCTCGTTGCCGCGGCGATGATCGGCGTCATTCTGATGCA GAAGTCGGAAGGCGGCGGCCTGGGCGTCGGCGGCAGTCCGGCGGGCCTGCTCTCGGCGCGCGGTGCGGCGGATTTCATGA CCCGCGCGACGACCGTGCTCGCCTGCCTGTTCGTGGGCCTGTCGATCCTGCTCGCCGCAATGGCCTCGGTCGGCCGCGGC GGCTCGACGATCGACACATCGCTGTCGAAATCCGCGCAAACGAGCGGGGGCGCCTCGACCTCGTCGATCACGGCCCCGGC GCAACCTGCCGAAGGCGTGGCAACGGGCGCGGCAACGGCGCCGCTGACGGACGACCCGCTGGCTGCCGCCGCGGCCGCCG CGGCGAGCCAGGGAAGCGCTCCGGCTCCGGCCGAAGACGGCAAGGCGCCACCGGCGACCCAATAA
Upstream 100 bases:
>100_bases GAAAGTCGTTTGAGCAAGCTGTGGCTTGAACCCCCGCCGCTTCGTCTCTATGTGCGCGGCGGGCGCGGTCCCATGTGAGG CCGCGCAAGTTCGGGAAAAT
Downstream 100 bases:
>100_bases ACGGCGGCTCCCGCCTCCGTATCAGCCCGCGCTCACGGAAATAATTTCCGCAGTTCGCGATTCGACGGCTTGCGCCGTCC CCCTCCCTTTGAGTAAGTCT
Product: preprotein translocase, SecG subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MMSSLFTFLLVVQALVAAAMIGVILMQKSEGGGLGVGGSPAGLLSARGAADFMTRATTVLACLFVGLSILLAAMASVGRG GSTIDTSLSKSAQTSGGASTSSITAPAQPAEGVATGAATAPLTDDPLAAAAAAAASQGSAPAPAEDGKAPPATQ
Sequences:
>Translated_154_residues MMSSLFTFLLVVQALVAAAMIGVILMQKSEGGGLGVGGSPAGLLSARGAADFMTRATTVLACLFVGLSILLAAMASVGRG GSTIDTSLSKSAQTSGGASTSSITAPAQPAEGVATGAATAPLTDDPLAAAAAAAASQGSAPAPAEDGKAPPATQ >Mature_154_residues MMSSLFTFLLVVQALVAAAMIGVILMQKSEGGGLGVGGSPAGLLSARGAADFMTRATTVLACLFVGLSILLAAMASVGRG GSTIDTSLSKSAQTSGGASTSSITAPAQPAEGVATGAATAPLTDDPLAAAAAAAASQGSAPAPAEDGKAPPATQ
Specific function: Involved In Protein Export. Participates In An Early Event Of Protein Translocation. [C]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14591; Mature: 14591
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSLFTFLLVVQALVAAAMIGVILMQKSEGGGLGVGGSPAGLLSARGAADFMTRATTVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH ACLFVGLSILLAAMASVGRGGSTIDTSLSKSAQTSGGASTSSITAPAQPAEGVATGAATA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLTDDPLAAAAAAAASQGSAPAPAEDGKAPPATQ CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMSSLFTFLLVVQALVAAAMIGVILMQKSEGGGLGVGGSPAGLLSARGAADFMTRATTVL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH ACLFVGLSILLAAMASVGRGGSTIDTSLSKSAQTSGGASTSSITAPAQPAEGVATGAATA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLTDDPLAAAAAAAASQGSAPAPAEDGKAPPATQ CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA