Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486651

Identifier: 103486651

GI number: 103486651

Start: 1196047

End: 1196358

Strand: Reverse

Name: 103486651

Synonym: Sala_1163

Alternate gene names: NA

Gene position: 1196358-1196047 (Counterclockwise)

Preceding gene: 103486652

Following gene: 103486649

Centisome position: 35.76

GC content: 65.06

Gene sequence:

>312_bases
ATGACGACGCCGACGACTGCCTTCAAGGTGCTTACCGCGCAGCAGTGGACCGATTTCGAGCGCGAGCGCGTCTTCCGCGG
CGCGCCGGTCGACATCGAGGATGGCTATATCCACCTGTCGACCGCGGCGCAGCTCGACACGACGATCGCAAAATATTTCG
CCGACCAGTCGGACCTGATGGTCGCCGAGGTGGATCTCGTCCAGTTGGGCGATGCCGTTCGCTGGGAACCCGCGCGCGGC
GGCGAGCTCTTCCCGCACATCTACGCCGAACTGCCGATCGAGGCGGTGGTGAGCCTGCAACAACGCGGCTGA

Upstream 100 bases:

>100_bases
TCGTGTCGGCCGCGCTGATCGAAGATGGCGACGAAGACGCGGATGACGGCCGCGACGTCGAGGTGGCGAGCGACAATCCG
GTGAGCGAAGCCCCCACCGA

Downstream 100 bases:

>100_bases
CCGCGCCGCACGGGCGGCATATCCCGGCCTCCTACCGCCGCTTCGCCCTCCACGCGCGCACCGCCGCCATTGTCTTTTCG
ACATGCGCCTGCGGCTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MTTPTTAFKVLTAQQWTDFERERVFRGAPVDIEDGYIHLSTAAQLDTTIAKYFADQSDLMVAEVDLVQLGDAVRWEPARG
GELFPHIYAELPIEAVVSLQQRG

Sequences:

>Translated_103_residues
MTTPTTAFKVLTAQQWTDFERERVFRGAPVDIEDGYIHLSTAAQLDTTIAKYFADQSDLMVAEVDLVQLGDAVRWEPARG
GELFPHIYAELPIEAVVSLQQRG
>Mature_102_residues
TTPTTAFKVLTAQQWTDFERERVFRGAPVDIEDGYIHLSTAAQLDTTIAKYFADQSDLMVAEVDLVQLGDAVRWEPARGG
ELFPHIYAELPIEAVVSLQQRG

Specific function: Unknown

COG id: COG3502

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11525; Mature: 11394

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPTTAFKVLTAQQWTDFERERVFRGAPVDIEDGYIHLSTAAQLDTTIAKYFADQSDLM
CCCCCCHHEEEHHHHCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEE
VAEVDLVQLGDAVRWEPARGGELFPHIYAELPIEAVVSLQQRG
EEEEHHHHHCCCCEECCCCCCCCCCHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
TTPTTAFKVLTAQQWTDFERERVFRGAPVDIEDGYIHLSTAAQLDTTIAKYFADQSDLM
CCCCCHHEEEHHHHCCCHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCEE
VAEVDLVQLGDAVRWEPARGGELFPHIYAELPIEAVVSLQQRG
EEEEHHHHHCCCCEECCCCCCCCCCHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA