Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is tauD [H]

Identifier: 103486649

GI number: 103486649

Start: 1194499

End: 1195344

Strand: Reverse

Name: tauD [H]

Synonym: Sala_1161

Alternate gene names: 103486649

Gene position: 1195344-1194499 (Counterclockwise)

Preceding gene: 103486651

Following gene: 103486647

Centisome position: 35.73

GC content: 66.55

Gene sequence:

>846_bases
ATGACTCTCGCCATCATCCCCAGCGGCCAGGCGTGCGGCGCGCACGTTACTGGCGTCGACCTGGCGCACCCGCTCGATCC
CGGCACCATCGCCGCCATCCGTGCGGCGTGGCTCGATCATCATGTGCTGGCTTTTCCGGACCAGAAGATGAGCGACGACG
ATCTCGAACGCTTCACCGCCTATTTCGGCGGTTTCGGCGACGATCCCTTCATTCGCCCGATTCCGGGCCGCAAGCATATC
ATCGCGGTCAAGCGCCGCGCCGACGAAACCGCGCCGCTCTTTGCCGAAAACTGGCACAGCGACTGGAGCTTCCAGGCCCG
CCCGCCCGCGGGCACGTGCCTCTTCGGCATCACCATTCCCCCGGTCGGCGGCAACACCGAATTTGCCAATCAGCACGCAG
CGCTCGATGCGATGCCCGCGGGGCTCCGCGCACGTATCGAGGGTTTGCGGGCGATCCACAGCGCCCGCGCGGGCTACGCC
CCTTCGGGCATGTACGGCGCGAACGACAGGGGCCGGAGCATGGATATCCGCTCGGACGATGCGGCGCTCGAAACGCAGCT
CCATCCCTTCGTTCGCGCGCACCCCGAAACGGGCCGCCTCGGCCTGTTCGGCTGCGCGGGTTATATCATCGGCTTTGAGG
GAATGGACGATGCCGAGGCGCGGCCGCTCCTCCACGAGCTCATCCAGTGGCAGGGGCGCGAAGAGTTCCGTTATTCGCAC
CGATGGGAGCCCGACATGCTCGTCATGTGGGACAATCGCTCGGTCCTCCACCGCGCGACGGGCGGTTATGACGGCCACGA
TCGCCTGCTTCACCGCACCACCATCGCGGCCTGGGAGGGAATCTAG

Upstream 100 bases:

>100_bases
ATCGGGCAATCCTCCATGCGATCCCGACCGAGGATGCGGAAAAAAGGCGGCCGCGTCCAGAGCGATTGACCGCACCGATC
AACCGGCGCAGCATGGCGTC

Downstream 100 bases:

>100_bases
AGCTTCGCCTCCTTGGCCAGCGTCCCGACCACTCCCCACGCGATCAGCGCCTGTCCGCCGAAATAAAGCGGCCAGACGAG
CCACATCGTCACATCCTTGG

Product: taurine catabolism dioxygenase TauD/TfdA

Products: NA

Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTLAIIPSGQACGAHVTGVDLAHPLDPGTIAAIRAAWLDHHVLAFPDQKMSDDDLERFTAYFGGFGDDPFIRPIPGRKHI
IAVKRRADETAPLFAENWHSDWSFQARPPAGTCLFGITIPPVGGNTEFANQHAALDAMPAGLRARIEGLRAIHSARAGYA
PSGMYGANDRGRSMDIRSDDAALETQLHPFVRAHPETGRLGLFGCAGYIIGFEGMDDAEARPLLHELIQWQGREEFRYSH
RWEPDMLVMWDNRSVLHRATGGYDGHDRLLHRTTIAAWEGI

Sequences:

>Translated_281_residues
MTLAIIPSGQACGAHVTGVDLAHPLDPGTIAAIRAAWLDHHVLAFPDQKMSDDDLERFTAYFGGFGDDPFIRPIPGRKHI
IAVKRRADETAPLFAENWHSDWSFQARPPAGTCLFGITIPPVGGNTEFANQHAALDAMPAGLRARIEGLRAIHSARAGYA
PSGMYGANDRGRSMDIRSDDAALETQLHPFVRAHPETGRLGLFGCAGYIIGFEGMDDAEARPLLHELIQWQGREEFRYSH
RWEPDMLVMWDNRSVLHRATGGYDGHDRLLHRTTIAAWEGI
>Mature_280_residues
TLAIIPSGQACGAHVTGVDLAHPLDPGTIAAIRAAWLDHHVLAFPDQKMSDDDLERFTAYFGGFGDDPFIRPIPGRKHII
AVKRRADETAPLFAENWHSDWSFQARPPAGTCLFGITIPPVGGNTEFANQHAALDAMPAGLRARIEGLRAIHSARAGYAP
SGMYGANDRGRSMDIRSDDAALETQLHPFVRAHPETGRLGLFGCAGYIIGFEGMDDAEARPLLHELIQWQGREEFRYSHR
WEPDMLVMWDNRSVLHRATGGYDGHDRLLHRTTIAAWEGI

Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes

COG id: COG2175

COG function: function code Q; Probable taurine catabolism dioxygenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfdA dioxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1786565, Length=273, Percent_Identity=31.1355311355311, Blast_Score=131, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6322971, Length=233, Percent_Identity=27.0386266094421, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003819 [H]

Pfam domain/function: PF02668 TauD [H]

EC number: =1.14.11.17 [H]

Molecular weight: Translated: 31036; Mature: 30905

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAIIPSGQACGAHVTGVDLAHPLDPGTIAAIRAAWLDHHVLAFPDQKMSDDDLERFTA
CEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
YFGGFGDDPFIRPIPGRKHIIAVKRRADETAPLFAENWHSDWSFQARPPAGTCLFGITIP
HHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCEEEEEEEEC
PVGGNTEFANQHAALDAMPAGLRARIEGLRAIHSARAGYAPSGMYGANDRGRSMDIRSDD
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
AALETQLHPFVRAHPETGRLGLFGCAGYIIGFEGMDDAEARPLLHELIQWQGREEFRYSH
HHHHHHHCHHHHCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCC
RWEPDMLVMWDNRSVLHRATGGYDGHDRLLHRTTIAAWEGI
CCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLAIIPSGQACGAHVTGVDLAHPLDPGTIAAIRAAWLDHHVLAFPDQKMSDDDLERFTA
EEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHH
YFGGFGDDPFIRPIPGRKHIIAVKRRADETAPLFAENWHSDWSFQARPPAGTCLFGITIP
HHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCEEECCCCCEEEEEEEEC
PVGGNTEFANQHAALDAMPAGLRARIEGLRAIHSARAGYAPSGMYGANDRGRSMDIRSDD
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
AALETQLHPFVRAHPETGRLGLFGCAGYIIGFEGMDDAEARPLLHELIQWQGREEFRYSH
HHHHHHHCHHHHCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHCC
RWEPDMLVMWDNRSVLHRATGGYDGHDRLLHRTTIAAWEGI
CCCCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]