Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is tatB [H]

Identifier: 103486632

GI number: 103486632

Start: 1180692

End: 1181069

Strand: Direct

Name: tatB [H]

Synonym: Sala_1144

Alternate gene names: 103486632

Gene position: 1180692-1181069 (Clockwise)

Preceding gene: 103486631

Following gene: 103486633

Centisome position: 35.3

GC content: 67.2

Gene sequence:

>378_bases
ATGTTCGATGTCGCGCCCACCGAGTTGCTGCTCGTCGTGGTGGTGGCCCTGGTGGTCATTGGGCCCAGGGATTTGCCCAA
GGCGATGCGCTTTGTCGGTAAATGGCTGGGCAAGGCGCGCGGCATGGCGCGCCATTTCCGCGCCGGGCTCGACACGATGA
TGCGCGAGGCCGAACTCGAAGAGCTCGAAAAACAGTGGCGCGAACAGAATGAGGCGATCATGCGCGAGTTTCCGCGCCTC
GACGACGACGCCGCGGCGACGCCGACGGGCATCGCGCCGCCGCCCGCCCAATCGGCGGATGCCGACAAGAGCGAGGAAAC
CGGACCGGGCGAGCCCGAAACGCATATCGTCCCGCCGCGGGGTGAGGCGCTGCCATGA

Upstream 100 bases:

>100_bases
TCGACGCCCAGCGCGCGCCTGACCTGAGCGCGACTCCTACCCCCACTGCGGAAACCGAAAACCGCTGACCGCTTTCCGTT
CGCGGGGGACAGGCTGAATC

Downstream 100 bases:

>100_bases
GCGATACAGCGCCCGACAACCCGGCGGAGGAGGATGGCGCGGGCGGCAAGATGCCGCTGCTCGATCATCTGATCGAGCTT
CGCTCGCGCTTGCTCAAATC

Product: twin-arginine translocation protein TatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL
DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP

Sequences:

>Translated_125_residues
MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL
DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP
>Mature_125_residues
MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL
DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003369
- InterPro:   IPR018448
- InterPro:   IPR003998 [H]

Pfam domain/function: PF02416 MttA_Hcf106 [H]

EC number: NA

Molecular weight: Translated: 13754; Mature: 13754

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEKQWREQNEAIMREFPRLDDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
GEALP
CCCCC
>Mature Secondary Structure
MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELEKQWREQNEAIMREFPRLDDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
GEALP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA