| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is tatB [H]
Identifier: 103486632
GI number: 103486632
Start: 1180692
End: 1181069
Strand: Direct
Name: tatB [H]
Synonym: Sala_1144
Alternate gene names: 103486632
Gene position: 1180692-1181069 (Clockwise)
Preceding gene: 103486631
Following gene: 103486633
Centisome position: 35.3
GC content: 67.2
Gene sequence:
>378_bases ATGTTCGATGTCGCGCCCACCGAGTTGCTGCTCGTCGTGGTGGTGGCCCTGGTGGTCATTGGGCCCAGGGATTTGCCCAA GGCGATGCGCTTTGTCGGTAAATGGCTGGGCAAGGCGCGCGGCATGGCGCGCCATTTCCGCGCCGGGCTCGACACGATGA TGCGCGAGGCCGAACTCGAAGAGCTCGAAAAACAGTGGCGCGAACAGAATGAGGCGATCATGCGCGAGTTTCCGCGCCTC GACGACGACGCCGCGGCGACGCCGACGGGCATCGCGCCGCCGCCCGCCCAATCGGCGGATGCCGACAAGAGCGAGGAAAC CGGACCGGGCGAGCCCGAAACGCATATCGTCCCGCCGCGGGGTGAGGCGCTGCCATGA
Upstream 100 bases:
>100_bases TCGACGCCCAGCGCGCGCCTGACCTGAGCGCGACTCCTACCCCCACTGCGGAAACCGAAAACCGCTGACCGCTTTCCGTT CGCGGGGGACAGGCTGAATC
Downstream 100 bases:
>100_bases GCGATACAGCGCCCGACAACCCGGCGGAGGAGGATGGCGCGGGCGGCAAGATGCCGCTGCTCGATCATCTGATCGAGCTT CGCTCGCGCTTGCTCAAATC
Product: twin-arginine translocation protein TatB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP
Sequences:
>Translated_125_residues MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP >Mature_125_residues MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELEELEKQWREQNEAIMREFPRL DDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPRGEALP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 13754; Mature: 13754
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEKQWREQNEAIMREFPRLDDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC GEALP CCCCC >Mature Secondary Structure MFDVAPTELLLVVVVALVVIGPRDLPKAMRFVGKWLGKARGMARHFRAGLDTMMREAELE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEKQWREQNEAIMREFPRLDDDAAATPTGIAPPPAQSADADKSEETGPGEPETHIVPPR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC GEALP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA