Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is tatA

Identifier: 103486631

GI number: 103486631

Start: 1180426

End: 1180659

Strand: Direct

Name: tatA

Synonym: Sala_1143

Alternate gene names: 103486631

Gene position: 1180426-1180659 (Clockwise)

Preceding gene: 103486630

Following gene: 103486632

Centisome position: 35.29

GC content: 61.54

Gene sequence:

>234_bases
ATGGGTAGCTTCAGCATCTGGCACTGGCTCGTGGTCGGGATCCTCGTCCTGCTGCTGTTCGGCAAGGGCCGTTTCTCGGA
CATGATGGGCGACGTTGCCAAGGGCATCAAAAGCTTCAAGAAGGGCATGTCGGAAGACGATGCACCGACGCCCGCACCGA
AACAGATCGACGCCCAGCGCGCGCCTGACCTGAGCGCGACTCCTACCCCCACTGCGGAAACCGAAAACCGCTGA

Upstream 100 bases:

>100_bases
CTCGATCCGGTCGATCTCGCTTTTGAAGCGGCGATGGGCGAGCTGGACCTAGTAAAAGACGGCGAAGAGGCTTAGATGAG
CCCTTCAAGGAGAATATGAG

Downstream 100 bases:

>100_bases
CCGCTTTCCGTTCGCGGGGGACAGGCTGAATCATGTTCGATGTCGCGCCCACCGAGTTGCTGCTCGTCGTGGTGGTGGCC
CTGGTGGTCATTGGGCCCAG

Product: twin arginine translocase protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR

Sequences:

>Translated_77_residues
MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR
>Mature_76_residues
GSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatA/E family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATA_SPHAL (Q1GU13)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_616192.1
- GeneID:   4080888
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_1143
- NMPDR:   fig|317655.9.peg.1079
- HOGENOM:   HBG751935
- OMA:   MTDDDAP
- ProtClustDB:   PRK00720
- BioCyc:   SALA317655:SALA_1143-MONOMER
- HAMAP:   MF_00236
- InterPro:   IPR003369
- InterPro:   IPR006312
- TIGRFAMs:   TIGR01411

Pfam domain/function: PF02416 MttA_Hcf106

EC number: NA

Molecular weight: Translated: 8363; Mature: 8232

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x110cae04)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
APDLSATPTPTAETENR
CCCCCCCCCCCCCCCCH
>Mature Secondary Structure 
GSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQR
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
APDLSATPTPTAETENR
CCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA