| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is tatA
Identifier: 103486631
GI number: 103486631
Start: 1180426
End: 1180659
Strand: Direct
Name: tatA
Synonym: Sala_1143
Alternate gene names: 103486631
Gene position: 1180426-1180659 (Clockwise)
Preceding gene: 103486630
Following gene: 103486632
Centisome position: 35.29
GC content: 61.54
Gene sequence:
>234_bases ATGGGTAGCTTCAGCATCTGGCACTGGCTCGTGGTCGGGATCCTCGTCCTGCTGCTGTTCGGCAAGGGCCGTTTCTCGGA CATGATGGGCGACGTTGCCAAGGGCATCAAAAGCTTCAAGAAGGGCATGTCGGAAGACGATGCACCGACGCCCGCACCGA AACAGATCGACGCCCAGCGCGCGCCTGACCTGAGCGCGACTCCTACCCCCACTGCGGAAACCGAAAACCGCTGA
Upstream 100 bases:
>100_bases CTCGATCCGGTCGATCTCGCTTTTGAAGCGGCGATGGGCGAGCTGGACCTAGTAAAAGACGGCGAAGAGGCTTAGATGAG CCCTTCAAGGAGAATATGAG
Downstream 100 bases:
>100_bases CCGCTTTCCGTTCGCGGGGGACAGGCTGAATCATGTTCGATGTCGCGCCCACCGAGTTGCTGCTCGTCGTGGTGGTGGCC CTGGTGGTCATTGGGCCCAG
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR
Sequences:
>Translated_77_residues MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR >Mature_76_residues GSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQRAPDLSATPTPTAETENR
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_SPHAL (Q1GU13)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616192.1 - GeneID: 4080888 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1143 - NMPDR: fig|317655.9.peg.1079 - HOGENOM: HBG751935 - OMA: MTDDDAP - ProtClustDB: PRK00720 - BioCyc: SALA317655:SALA_1143-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8363; Mature: 8232
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x110cae04)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQR CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC APDLSATPTPTAETENR CCCCCCCCCCCCCCCCH >Mature Secondary Structure GSFSIWHWLVVGILVLLLFGKGRFSDMMGDVAKGIKSFKKGMSEDDAPTPAPKQIDAQR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC APDLSATPTPTAETENR CCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA