Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486616

Identifier: 103486616

GI number: 103486616

Start: 1166876

End: 1167517

Strand: Reverse

Name: 103486616

Synonym: Sala_1128

Alternate gene names: NA

Gene position: 1167517-1166876 (Counterclockwise)

Preceding gene: 103486617

Following gene: 103486615

Centisome position: 34.9

GC content: 63.71

Gene sequence:

>642_bases
ATGAAAAATATCGCAACTTGGACGGTCCTGGCGCTGGCGACGACCCTCGCCGGATGCGCGGGCAGCGCCTACAGCAATCG
CAGCCTGGAATCGGTCCATCAACCGGTCGTGCGCAACAGCATCTATCAGTTCGATGTCGCCGCGAAGGATGGCGAACTGC
CGCCCAGCGAACAGGGTCGTCTGCAAGGCTGGTTCGATGCGATGGGCATCCGCTATGGCGACCGCGTCGCAATCGAGGAC
CCCTCGCTTTATGGCGCATCCTCGGCGCAGGCGACCGTCCGGGCGATGGTCGAACGCCGCGGACTTCTGCTCAGCAAGGA
TGTGCCGGTGACCACCGGTGCTGTTCCCGACGGTCATATCCGCGTCGTGGTTACGCGCGCATCGGCGTCGGTGCCGGGTT
GCCCCGACTGGAACAGCAAGTCGTCGCTGAACTCGCTCAACGCGACTTCGTCCAATTATGGCTGCGCGACCAACAGCAAT
CTTGCAGCAATGGTCGCCGACCCCAACGACCTCATCAAAGGCACGCGCGACACAGGCCATGACCCGGTCGCGGCAACGCG
CGCCATCCAGACCTATCGCACGAAACCTCAGACCGGGGCCGGCGAACTGACCAAAACACCCACGAGCGGAGGCGGCCAGT
GA

Upstream 100 bases:

>100_bases
GACTCCAATGTGGGTGATGCCGACCGCCCGCGCGGCGGCGGCAGCGACGCCTCGCCCGGTTTCAGCATCAAGTGACACGG
CCGATTTCAGGAGCAAAGTG

Downstream 100 bases:

>100_bases
ACGCTCATTTCAAATCTGCAACGCTGCGCGATCCTTTCAACGCGTTCGTCTGTGACGATGATACGCTGGAACTGATCCGC
GTCGCGGCCAGCGACATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKNIATWTVLALATTLAGCAGSAYSNRSLESVHQPVVRNSIYQFDVAAKDGELPPSEQGRLQGWFDAMGIRYGDRVAIED
PSLYGASSAQATVRAMVERRGLLLSKDVPVTTGAVPDGHIRVVVTRASASVPGCPDWNSKSSLNSLNATSSNYGCATNSN
LAAMVADPNDLIKGTRDTGHDPVAATRAIQTYRTKPQTGAGELTKTPTSGGGQ

Sequences:

>Translated_213_residues
MKNIATWTVLALATTLAGCAGSAYSNRSLESVHQPVVRNSIYQFDVAAKDGELPPSEQGRLQGWFDAMGIRYGDRVAIED
PSLYGASSAQATVRAMVERRGLLLSKDVPVTTGAVPDGHIRVVVTRASASVPGCPDWNSKSSLNSLNATSSNYGCATNSN
LAAMVADPNDLIKGTRDTGHDPVAATRAIQTYRTKPQTGAGELTKTPTSGGGQ
>Mature_213_residues
MKNIATWTVLALATTLAGCAGSAYSNRSLESVHQPVVRNSIYQFDVAAKDGELPPSEQGRLQGWFDAMGIRYGDRVAIED
PSLYGASSAQATVRAMVERRGLLLSKDVPVTTGAVPDGHIRVVVTRASASVPGCPDWNSKSSLNSLNATSSNYGCATNSN
LAAMVADPNDLIKGTRDTGHDPVAATRAIQTYRTKPQTGAGELTKTPTSGGGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22337; Mature: 22337

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIATWTVLALATTLAGCAGSAYSNRSLESVHQPVVRNSIYQFDVAAKDGELPPSEQGR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
LQGWFDAMGIRYGDRVAIEDPSLYGASSAQATVRAMVERRGLLLSKDVPVTTGAVPDGHI
CHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCE
RVVVTRASASVPGCPDWNSKSSLNSLNATSSNYGCATNSNLAAMVADPNDLIKGTRDTGH
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCC
DPVAATRAIQTYRTKPQTGAGELTKTPTSGGGQ
CCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKNIATWTVLALATTLAGCAGSAYSNRSLESVHQPVVRNSIYQFDVAAKDGELPPSEQGR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
LQGWFDAMGIRYGDRVAIEDPSLYGASSAQATVRAMVERRGLLLSKDVPVTTGAVPDGHI
CHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCE
RVVVTRASASVPGCPDWNSKSSLNSLNATSSNYGCATNSNLAAMVADPNDLIKGTRDTGH
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCC
DPVAATRAIQTYRTKPQTGAGELTKTPTSGGGQ
CCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA