| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486612
Identifier: 103486612
GI number: 103486612
Start: 1162461
End: 1163462
Strand: Direct
Name: 103486612
Synonym: Sala_1124
Alternate gene names: NA
Gene position: 1162461-1163462 (Clockwise)
Preceding gene: 103486610
Following gene: 103486620
Centisome position: 34.75
GC content: 66.57
Gene sequence:
>1002_bases GTGAAACTGGCTTCGCTCAAGCACGGCCGTGATGGCCGCCTCGTCGTCGTTTCGGACGATCTGGCTTGGTATTCCGACGC ATCGGCGATCGCGCCGACGATGCAGGCGGCGCTCGACGACTGGGCCGATGCTGCGCCGCGTCTGGCCGCGCTGGCCGAGG ATTTGAACCATGACGCGATCCCCAAGGAGCGCTTTCACGAGCGCGACGCCGCATCGCCACTGCCACGCGCCTATCAATGG GCCGACGGCAGCGCCTATGTGAACCATGTCGCGCTGGTGCGCCAGGCGCGAGGCGCGGAAATGCCCGAGAGTTTCTGGCA CGATCCGCTGATGTACCAGGGCGGCAGCGACGCTTTCCTTGCGCCGCGCGACCCGATCCCGCTCGGCGATCCGGCATGGG GGTGCGACATGGAGGCCGAGATCGTCGTCGTCACCGACGATGTTCCCGCCGGGATCGATCCCGTCACGGCGCGCGAGAAG GTTCTGCTCGTCGGCCTGACCAACGATGTCTCGCTCCGCGGACTGATCCCCGCCGAACTCGCCAAGGGGTTCGGCTTTTT CCAGTCCAAGCCGTCGAGTGCGATGTCGCCGGTTTTCGTGACGCCCGACGCGCTGGGCGACCAATGGAAGGATGGCAAGC TGCATGGCACGCTGTGCGTTGACCTCAACGGTCAGCCGCTCGGCCGCGCCGATGCCGGCGTCGACATGACCTTCGATTTC GGTCAGCTCATCGCCCACGCGGCCAAAACGCGCAACCTTGGCGCGGGCACGATCATCGGGTCAGGCACGGTGTCGAACCG TGACGCCGACGGCGGCCCCGGCAAGCCGGTGAGCGAGGGCGGACTGGGGTATAGCTGCCTTGCCGAAGTGCGGACGGTCG AAACGATCCGGCACGGCGAAGCGAAGACGCCCTTCATGCAGCGGGGCGATACGGTGCGTATCTGGATGGACGATGCGCGC CACCACAGCATCTTCGGCGCGATTGAGCAGACGGTCGCCTGA
Upstream 100 bases:
>100_bases GCGGCTTTACCTGTTTCGCATCGATCACGACGTCGCGCTGATTATCGCTTCCTGACAGGCGATTTGCGGTTTCAGCCGAT CGTCAGACAAGGGAGTTTTC
Downstream 100 bases:
>100_bases CAAGAGGAAGGGGAGGGCGGAATCGCTGCCGCCCTCCCTTGCCGGTCTGACCGGTCGATAGCCTATCGGCCGCCGAAGCT GCCGCCAGCCATTGCGTCGC
Product: fumarylacetoacetate (FAA) hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; 2-Keto-4-Pentenoate Hydratase; Aromatic Amino Acid Degradation Protein; Fumarylacetoacetase; Fumarylacetoacetate Hydrolase Family; Fumarylacetoacetate; Fumarylacetoacetase Protein; Hydrolase; 2-Oxopent-4-Enoate Hydratase; Potential Fumarylacetoacetate Hydrolase
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKLASLKHGRDGRLVVVSDDLAWYSDASAIAPTMQAALDDWADAAPRLAALAEDLNHDAIPKERFHERDAASPLPRAYQW ADGSAYVNHVALVRQARGAEMPESFWHDPLMYQGGSDAFLAPRDPIPLGDPAWGCDMEAEIVVVTDDVPAGIDPVTAREK VLLVGLTNDVSLRGLIPAELAKGFGFFQSKPSSAMSPVFVTPDALGDQWKDGKLHGTLCVDLNGQPLGRADAGVDMTFDF GQLIAHAAKTRNLGAGTIIGSGTVSNRDADGGPGKPVSEGGLGYSCLAEVRTVETIRHGEAKTPFMQRGDTVRIWMDDAR HHSIFGAIEQTVA
Sequences:
>Translated_333_residues MKLASLKHGRDGRLVVVSDDLAWYSDASAIAPTMQAALDDWADAAPRLAALAEDLNHDAIPKERFHERDAASPLPRAYQW ADGSAYVNHVALVRQARGAEMPESFWHDPLMYQGGSDAFLAPRDPIPLGDPAWGCDMEAEIVVVTDDVPAGIDPVTAREK VLLVGLTNDVSLRGLIPAELAKGFGFFQSKPSSAMSPVFVTPDALGDQWKDGKLHGTLCVDLNGQPLGRADAGVDMTFDF GQLIAHAAKTRNLGAGTIIGSGTVSNRDADGGPGKPVSEGGLGYSCLAEVRTVETIRHGEAKTPFMQRGDTVRIWMDDAR HHSIFGAIEQTVA >Mature_333_residues MKLASLKHGRDGRLVVVSDDLAWYSDASAIAPTMQAALDDWADAAPRLAALAEDLNHDAIPKERFHERDAASPLPRAYQW ADGSAYVNHVALVRQARGAEMPESFWHDPLMYQGGSDAFLAPRDPIPLGDPAWGCDMEAEIVVVTDDVPAGIDPVTAREK VLLVGLTNDVSLRGLIPAELAKGFGFFQSKPSSAMSPVFVTPDALGDQWKDGKLHGTLCVDLNGQPLGRADAGVDMTFDF GQLIAHAAKTRNLGAGTIIGSGTVSNRDADGGPGKPVSEGGLGYSCLAEVRTVETIRHGEAKTPFMQRGDTVRIWMDDAR HHSIFGAIEQTVA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35604; Mature: 35604
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLASLKHGRDGRLVVVSDDLAWYSDASAIAPTMQAALDDWADAAPRLAALAEDLNHDAI CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKERFHERDAASPLPRAYQWADGSAYVNHVALVRQARGAEMPESFWHDPLMYQGGSDAFL CHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCEE APRDPIPLGDPAWGCDMEAEIVVVTDDVPAGIDPVTAREKVLLVGLTNDVSLRGLIPAEL CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCHHHH AKGFGFFQSKPSSAMSPVFVTPDALGDQWKDGKLHGTLCVDLNGQPLGRADAGVDMTFDF HHHCCCCCCCCCCCCCCEEECCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECH GQLIAHAAKTRNLGAGTIIGSGTVSNRDADGGPGKPVSEGGLGYSCLAEVRTVETIRHGE HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC AKTPFMQRGDTVRIWMDDARHHSIFGAIEQTVA CCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MKLASLKHGRDGRLVVVSDDLAWYSDASAIAPTMQAALDDWADAAPRLAALAEDLNHDAI CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PKERFHERDAASPLPRAYQWADGSAYVNHVALVRQARGAEMPESFWHDPLMYQGGSDAFL CHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCEE APRDPIPLGDPAWGCDMEAEIVVVTDDVPAGIDPVTAREKVLLVGLTNDVSLRGLIPAEL CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCHHHH AKGFGFFQSKPSSAMSPVFVTPDALGDQWKDGKLHGTLCVDLNGQPLGRADAGVDMTFDF HHHCCCCCCCCCCCCCCEEECCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEECH GQLIAHAAKTRNLGAGTIIGSGTVSNRDADGGPGKPVSEGGLGYSCLAEVRTVETIRHGE HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC AKTPFMQRGDTVRIWMDDARHHSIFGAIEQTVA CCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA