Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yedI [H]

Identifier: 103486601

GI number: 103486601

Start: 1148501

End: 1149436

Strand: Direct

Name: yedI [H]

Synonym: Sala_1113

Alternate gene names: 103486601

Gene position: 1148501-1149436 (Clockwise)

Preceding gene: 103486600

Following gene: 103486610

Centisome position: 34.33

GC content: 64.53

Gene sequence:

>936_bases
ATGCCCTCCGGCCTCTTTGCCCTGCTCGACGACGTTGCCACCATTGCCAAGGTTGCCGCGGCGAGCATCGACGACATCGG
TGCCGCAGCGTCGAAAGCGGGGGTCAAGGCCGCGGGGGTGGTGGTCGACGACGCCGCGGTGACGCCGCGCTATGTGACCG
GCTTTCAGCCGAACCGCGAACTGCCGATCATCTGGCGCATCGCCAAGGGGTCGATGTTCAACAAGCTGGTGCTGATCCTG
CCCGCGCTGCTGCTGCTGTCGGCGGTGGCGCAATGGGCGATCACGCCGCTGCTGATGGTCGGCGGCGCCTATCTGTGTTT
CGAGGGCGCCGAGAAGGTCTGGCATTCGCTCGCCGCCGACAAGCACAGCCTGGCCGAAGAAGCGGCTACCGTGATCGATC
CGAACCATGAGGAGGTCATGGTCAAGGGCGCGATCCGCACCGACTTCATCCTGTCGGCCGAAATCATGGTGATCGCCCTC
AACGAGGTGCTCGACGAAGCGATGCTGATGCGTACGGCAACGCTGGTTGTTGTCGCCATCGCAATCACGGTTGCGGTTTA
TGGCGTTGTCGGGCTGATCGTGAAGATGGACGACATCGGGCTGCACATGGCCAGGGAAGGGCATAACGCCCGGCGCGCGA
TCGGGCGCGGACTTGTCGCTTTTATGCCCAAGCTGCTCGCCACGCTGGCGACGGTCGGCACCGCGGCGATGCTGTGGGTC
GGCGGCCAGATTTTCCTCCACGGCCTCGACGAATATCATATCGGCAATCTGGGCCACGGCCTGCACGATTTTGCGTATTC
GGTCGCGGGCGGATTGCCCGGCGCGGGTGTGTGGGAATGGCTGATCAATGCCGGCGGCGCGGGCGTGTTCGGCCTGCTGC
TGGGCGGAGTGATCGTGGCGGCACTGCATCTGGTGCCGGGAAAGAAGGAGCACTAA

Upstream 100 bases:

>100_bases
ATTGCGGATGCCAAGCTGAAAACTTGCGCTTTCCTATCAATCCGTTCGACACGAACGGGTAGATGGGTCGCTCCAGACTC
CTCAGAAGGACCAAGACCCT

Downstream 100 bases:

>100_bases
TTTGCCCTCTCCTTCAGGGGAGGGCAGCGAGACTTGGCAGCTTGCTGCCTAGTCGCAGCCGGTGGGGGCATCGGCGTAGC
GCAAGGTTTCTGGGCACCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MPSGLFALLDDVATIAKVAAASIDDIGAAASKAGVKAAGVVVDDAAVTPRYVTGFQPNRELPIIWRIAKGSMFNKLVLIL
PALLLLSAVAQWAITPLLMVGGAYLCFEGAEKVWHSLAADKHSLAEEAATVIDPNHEEVMVKGAIRTDFILSAEIMVIAL
NEVLDEAMLMRTATLVVVAIAITVAVYGVVGLIVKMDDIGLHMAREGHNARRAIGRGLVAFMPKLLATLATVGTAAMLWV
GGQIFLHGLDEYHIGNLGHGLHDFAYSVAGGLPGAGVWEWLINAGGAGVFGLLLGGVIVAALHLVPGKKEH

Sequences:

>Translated_311_residues
MPSGLFALLDDVATIAKVAAASIDDIGAAASKAGVKAAGVVVDDAAVTPRYVTGFQPNRELPIIWRIAKGSMFNKLVLIL
PALLLLSAVAQWAITPLLMVGGAYLCFEGAEKVWHSLAADKHSLAEEAATVIDPNHEEVMVKGAIRTDFILSAEIMVIAL
NEVLDEAMLMRTATLVVVAIAITVAVYGVVGLIVKMDDIGLHMAREGHNARRAIGRGLVAFMPKLLATLATVGTAAMLWV
GGQIFLHGLDEYHIGNLGHGLHDFAYSVAGGLPGAGVWEWLINAGGAGVFGLLLGGVIVAALHLVPGKKEH
>Mature_310_residues
PSGLFALLDDVATIAKVAAASIDDIGAAASKAGVKAAGVVVDDAAVTPRYVTGFQPNRELPIIWRIAKGSMFNKLVLILP
ALLLLSAVAQWAITPLLMVGGAYLCFEGAEKVWHSLAADKHSLAEEAATVIDPNHEEVMVKGAIRTDFILSAEIMVIALN
EVLDEAMLMRTATLVVVAIAITVAVYGVVGLIVKMDDIGLHMAREGHNARRAIGRGLVAFMPKLLATLATVGTAAMLWVG
GQIFLHGLDEYHIGNLGHGLHDFAYSVAGGLPGAGVWEWLINAGGAGVFGLLLGGVIVAALHLVPGKKEH

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=273, Percent_Identity=45.0549450549451, Blast_Score=208, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 32541; Mature: 32410

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSGLFALLDDVATIAKVAAASIDDIGAAASKAGVKAAGVVVDDAAVTPRYVTGFQPNRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEECCCCCCC
LPIIWRIAKGSMFNKLVLILPALLLLSAVAQWAITPLLMVGGAYLCFEGAEKVWHSLAAD
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHH
KHSLAEEAATVIDPNHEEVMVKGAIRTDFILSAEIMVIALNEVLDEAMLMRTATLVVVAI
HHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITVAVYGVVGLIVKMDDIGLHMAREGHNARRAIGRGLVAFMPKLLATLATVGTAAMLWV
HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GGQIFLHGLDEYHIGNLGHGLHDFAYSVAGGLPGAGVWEWLINAGGAGVFGLLLGGVIVA
CCHHEEECCCHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ALHLVPGKKEH
HHHHCCCCCCC
>Mature Secondary Structure 
PSGLFALLDDVATIAKVAAASIDDIGAAASKAGVKAAGVVVDDAAVTPRYVTGFQPNRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEECCCCCCC
LPIIWRIAKGSMFNKLVLILPALLLLSAVAQWAITPLLMVGGAYLCFEGAEKVWHSLAAD
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHH
KHSLAEEAATVIDPNHEEVMVKGAIRTDFILSAEIMVIALNEVLDEAMLMRTATLVVVAI
HHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITVAVYGVVGLIVKMDDIGLHMAREGHNARRAIGRGLVAFMPKLLATLATVGTAAMLWV
HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GGQIFLHGLDEYHIGNLGHGLHDFAYSVAGGLPGAGVWEWLINAGGAGVFGLLLGGVIVA
CCHHEEECCCHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
ALHLVPGKKEH
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]