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The map label for this gene is fecI [C]

Identifier: 103486597

GI number: 103486597

Start: 1140939

End: 1141460

Strand: Reverse

Name: fecI [C]

Synonym: Sala_1108

Alternate gene names: 103486597

Gene position: 1141460-1140939 (Counterclockwise)

Preceding gene: 103486598

Following gene: 103486596

Centisome position: 34.12

GC content: 67.82

Gene sequence:

>522_bases
ATGACCGAGCCGCGCGATCAGAGCGACGCCCTGCAGGGCATTGAGGGCGTATTGCTCGCCCATCGCGACCGCATCCTGCG
CTTCCTCGAAATGCGCGGTGCGGGCGACAGTGCGGAAGATCTGTTCCAGGATTTGTGGATGCGGCTGACCGAACGCGCGA
CGGGTCCCGTCGCCGATCCGCTATCCTATGCGATGCGCGCGGCCAACAATCTGATGCTCGATCGCTACCGCTCGGCGCGC
CAGCGCGAGCTTCGCGACAAGGCGTGGGGCGAGAGCGCGGCGATGCACAGCCCGTCGAGCGAGGCGGCGCTCATCTCGCG
CGAGCAACTCGCGCTCGCCGATGCGGCGATCGCGGCAACGGGCGAGCGGCCCGCGCGCATCTTTCGCCGCTTTCGCGTCG
ATGGCGTCCACCAGCGCGAGATTGCCCGCGAAATGGGCGTCAGCCTGAGCACGGTCGAAGCCGATCTGCGCAAGGTTTAT
GCGGCGCTGGCGGCGCTGAGGAGGCAGTTCGATGCCGGTTGA

Upstream 100 bases:

>100_bases
CCGACGATGGGCGCTATATGACGGCAAGCTCAGGGGGACATTTGCCGCGTGGCGAGGCGGCCCGTTCCGGCAAGAAATGG
CATTCCAAAGCAAGCAATTC

Downstream 100 bases:

>100_bases
ACCGAACGACGCCGCCGAAGCGCGCGCGATCGACTGGCTGGTTCGCCAGCGCGATCCGGCATTCGACGATTGGGATGGCT
TCACCGACTGGCTGGCCGAA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTEPRDQSDALQGIEGVLLAHRDRILRFLEMRGAGDSAEDLFQDLWMRLTERATGPVADPLSYAMRAANNLMLDRYRSAR
QRELRDKAWGESAAMHSPSSEAALISREQLALADAAIAATGERPARIFRRFRVDGVHQREIAREMGVSLSTVEADLRKVY
AALAALRRQFDAG

Sequences:

>Translated_173_residues
MTEPRDQSDALQGIEGVLLAHRDRILRFLEMRGAGDSAEDLFQDLWMRLTERATGPVADPLSYAMRAANNLMLDRYRSAR
QRELRDKAWGESAAMHSPSSEAALISREQLALADAAIAATGERPARIFRRFRVDGVHQREIAREMGVSLSTVEADLRKVY
AALAALRRQFDAG
>Mature_172_residues
TEPRDQSDALQGIEGVLLAHRDRILRFLEMRGAGDSAEDLFQDLWMRLTERATGPVADPLSYAMRAANNLMLDRYRSARQ
RELRDKAWGESAAMHSPSSEAALISREQLALADAAIAATGERPARIFRRFRVDGVHQREIAREMGVSLSTVEADLRKVYA
ALAALRRQFDAG

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19354; Mature: 19223

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPRDQSDALQGIEGVLLAHRDRILRFLEMRGAGDSAEDLFQDLWMRLTERATGPVADP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
LSYAMRAANNLMLDRYRSARQRELRDKAWGESAAMHSPSSEAALISREQLALADAAIAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
GERPARIFRRFRVDGVHQREIAREMGVSLSTVEADLRKVYAALAALRRQFDAG
CCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEPRDQSDALQGIEGVLLAHRDRILRFLEMRGAGDSAEDLFQDLWMRLTERATGPVADP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHH
LSYAMRAANNLMLDRYRSARQRELRDKAWGESAAMHSPSSEAALISREQLALADAAIAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
GERPARIFRRFRVDGVHQREIAREMGVSLSTVEADLRKVYAALAALRRQFDAG
CCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA