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The map label for this gene is yadH [H]

Identifier: 103486584

GI number: 103486584

Start: 1123565

End: 1124437

Strand: Direct

Name: yadH [H]

Synonym: Sala_1095

Alternate gene names: 103486584

Gene position: 1123565-1124437 (Clockwise)

Preceding gene: 103486581

Following gene: 103486586

Centisome position: 33.59

GC content: 61.4

Gene sequence:

>873_bases
ATGAACGACCAGCCCAAAATTTCGAACCCCGACTCAGCGAATATCCGTCCGGTTCCGGCTTTTGCCGAACCCGGCATCCC
GCACATCCGCGCGCTCAACGTGCCGGCCATGCAGGCGCTATATGTCAAGGAGGTGCGGCGGTTTTTCAAGGTCCAGCTGC
AAACTATCTGGGCCCCGGCGATCACGACGCTCCTTTTTCTCGTCATTTTCACCGTCGCGCTCGGCGGTGCGGGGCGCACC
GTCATCGGCGTGCCTTTTGCCGATTTCATCGCACCGGGGCTCATCATGATGGCGATGCTGCAGAACAGCTTTGCCAATTC
CAGCTTTTCGCTGCTCGTCGGCAAGATCCAGGGCACGATCGTCGATTATCTGATGCCGCCGCTCGCGGTAGGCGAGCTGG
TCATCGCGCTGATCGGCGCCGCGATCACGCGCGCGATCCTCGTCGGCTTCGCGCTCTGGATCGCGATGCTCTTCTGGCCC
GGCGTCGACGTCGGGGTCAATCATCTGTGGGCGGTTGGGGTTTTTGGCGTGCTCGGCGCGATGATGCTGGGGTTCCTCGG
GCTCATCACATCGGTATGGGCTGAAAAGTTCGACCATGCCGCGGCGGTGACCAACTTCGTCGTGACCCCGCTGGCGCTTC
TGTCGGGCACTTTCTATTCGGTCGACCTGCTCGCGCCATGGTTTCAGGGGATCGCACACGCGAACCCCGTCTATTACGCA
ATCATGGGCTTTCGTTACGGCTTCATCGGCACGGTCGATGCGACGATCGCCAATCCCGTGCTGACCGCGCTGTTGGTGCT
CGTCGCGGTCAATGTCGTGCTGGGCTATGCAACCTATCGCCTGCTGGCGTCGGGCTGGAAACTGAAAGCCTGA

Upstream 100 bases:

>100_bases
CCCGCCACGGGCCATAGCGTGTGCCTTGCGATCCTTTCGGGATCGTTGTCGCGACGGCCCAGCTTGCGGTAAGATCGGGG
AGGCGATAGGCGAGAACGCC

Downstream 100 bases:

>100_bases
CGCAGCGCTCAATGGCGATGGATGGCGCGCACCCGGTAACGTCCCCGTTCCATCCCGTCGAACATCGTTTCGATCTGCGG
ATGGTCGATCGGCCCGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNDQPKISNPDSANIRPVPAFAEPGIPHIRALNVPAMQALYVKEVRRFFKVQLQTIWAPAITTLLFLVIFTVALGGAGRT
VIGVPFADFIAPGLIMMAMLQNSFANSSFSLLVGKIQGTIVDYLMPPLAVGELVIALIGAAITRAILVGFALWIAMLFWP
GVDVGVNHLWAVGVFGVLGAMMLGFLGLITSVWAEKFDHAAAVTNFVVTPLALLSGTFYSVDLLAPWFQGIAHANPVYYA
IMGFRYGFIGTVDATIANPVLTALLVLVAVNVVLGYATYRLLASGWKLKA

Sequences:

>Translated_290_residues
MNDQPKISNPDSANIRPVPAFAEPGIPHIRALNVPAMQALYVKEVRRFFKVQLQTIWAPAITTLLFLVIFTVALGGAGRT
VIGVPFADFIAPGLIMMAMLQNSFANSSFSLLVGKIQGTIVDYLMPPLAVGELVIALIGAAITRAILVGFALWIAMLFWP
GVDVGVNHLWAVGVFGVLGAMMLGFLGLITSVWAEKFDHAAAVTNFVVTPLALLSGTFYSVDLLAPWFQGIAHANPVYYA
IMGFRYGFIGTVDATIANPVLTALLVLVAVNVVLGYATYRLLASGWKLKA
>Mature_290_residues
MNDQPKISNPDSANIRPVPAFAEPGIPHIRALNVPAMQALYVKEVRRFFKVQLQTIWAPAITTLLFLVIFTVALGGAGRT
VIGVPFADFIAPGLIMMAMLQNSFANSSFSLLVGKIQGTIVDYLMPPLAVGELVIALIGAAITRAILVGFALWIAMLFWP
GVDVGVNHLWAVGVFGVLGAMMLGFLGLITSVWAEKFDHAAAVTNFVVTPLALLSGTFYSVDLLAPWFQGIAHANPVYYA
IMGFRYGFIGTVDATIANPVLTALLVLVAVNVVLGYATYRLLASGWKLKA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=34.765625, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 31091; Mature: 31091

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDQPKISNPDSANIRPVPAFAEPGIPHIRALNVPAMQALYVKEVRRFFKVQLQTIWAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTLLFLVIFTVALGGAGRTVIGVPFADFIAPGLIMMAMLQNSFANSSFSLLVGKIQGTI
HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VDYLMPPLAVGELVIALIGAAITRAILVGFALWIAMLFWPGVDVGVNHLWAVGVFGVLGA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MMLGFLGLITSVWAEKFDHAAAVTNFVVTPLALLSGTFYSVDLLAPWFQGIAHANPVYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
IMGFRYGFIGTVDATIANPVLTALLVLVAVNVVLGYATYRLLASGWKLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDQPKISNPDSANIRPVPAFAEPGIPHIRALNVPAMQALYVKEVRRFFKVQLQTIWAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ITTLLFLVIFTVALGGAGRTVIGVPFADFIAPGLIMMAMLQNSFANSSFSLLVGKIQGTI
HHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VDYLMPPLAVGELVIALIGAAITRAILVGFALWIAMLFWPGVDVGVNHLWAVGVFGVLGA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MMLGFLGLITSVWAEKFDHAAAVTNFVVTPLALLSGTFYSVDLLAPWFQGIAHANPVYYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHH
IMGFRYGFIGTVDATIANPVLTALLVLVAVNVVLGYATYRLLASGWKLKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]