| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is apaG [H]
Identifier: 103486576
GI number: 103486576
Start: 1116378
End: 1116779
Strand: Direct
Name: apaG [H]
Synonym: Sala_1087
Alternate gene names: 103486576
Gene position: 1116378-1116779 (Clockwise)
Preceding gene: 103486575
Following gene: 103486577
Centisome position: 33.37
GC content: 66.92
Gene sequence:
>402_bases ATGATCGACTCCTTCTTTCCCTTCTCGGCGACCACCGGACCCGTGACGGTGCGCGTGGCGGTGAGCTATCTGCCCGAACA GTCGCATCCGGCGCTCGGTCGCTGGTTCTGGGCCTATCATGTGCGGGTCGAAAACCATGGCGACAGCGCGGTGCAGCTGC TCTCGCGCCACTGGCGGATCAGCGACGCGCGCGGGCAGGTGAGCGAGGTCGAGGGCGAGGGTGTGGTTGGCGAACAGCCG CTGATCGGCGCGGGCGGGGCCTATGACTATGTCTCCGGCTGCCCGCTGCCGACGCCCGAAGGGTCGATGGTCGGCAGCTA TACGATGGAGATGAGCGACGGATCGCAGATGCTCGTCGCGATCCCGCACTTCCCTCTGGTGGCGCCCGCGACGGCATCAT GA
Upstream 100 bases:
>100_bases TGCTGCGTATCAACATCGGGCTCGAAGATCCGCGCGACATCATCGCCGATCTGGACCAGGCATTGACCAGGGTCGGGCTT TAGGGGAATCTGGCGCCGCG
Downstream 100 bases:
>100_bases AGCGCACGCACCTGCCCCTCAACGCGCTCCGCGTCTTCGATGCCGCTGCCCGGCATTTGAGTTTCACGCGCGCCGCCGAC GAGCTGGCGGTGACGCCCGC
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS
Sequences:
>Translated_133_residues MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS >Mature_133_residues MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRISDARGQVSEVEGEGVVGEQP LIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVAIPHFPLVAPATAS
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812188, Length=126, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI15812186, Length=126, Percent_Identity=42.8571428571429, Blast_Score=91, Evalue=4e-19, Organism=Homo sapiens, GI7661672, Length=117, Percent_Identity=35.8974358974359, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786235, Length=116, Percent_Identity=43.1034482758621, Blast_Score=95, Evalue=1e-21, Organism=Drosophila melanogaster, GI21356905, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI24644238, Length=117, Percent_Identity=37.6068376068376, Blast_Score=79, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 14264; Mature: 14264
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRI CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCC SDARGQVSEVEGEGVVGEQPLIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVA CCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE IPHFPLVAPATAS ECCCCEECCCCCC >Mature Secondary Structure MIDSFFPFSATTGPVTVRVAVSYLPEQSHPALGRWFWAYHVRVENHGDSAVQLLSRHWRI CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHCCC SDARGQVSEVEGEGVVGEQPLIGAGGAYDYVSGCPLPTPEGSMVGSYTMEMSDGSQMLVA CCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEE IPHFPLVAPATAS ECCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA