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The map label for this gene is recO [H]

Identifier: 103486573

GI number: 103486573

Start: 1113355

End: 1113933

Strand: Direct

Name: recO [H]

Synonym: Sala_1084

Alternate gene names: 103486573

Gene position: 1113355-1113933 (Clockwise)

Preceding gene: 103486572

Following gene: 103486574

Centisome position: 33.28

GC content: 68.39

Gene sequence:

>579_bases
GTGCGCGCGCATGGCGAGCATGGCGCGATCCTGCGTGCGCTGACGCACGAGGCGGGGCTGGTCGCGGGCTATGTCCGCGG
CGGGCGATCGCGGCGGCTGCGGCCCATATTGATGCCGGGCAACCGCGTTGCGCTGGAGCTGCGGTCGCGCACCGAAGAGC
AGCTTGGCGGCGCGACGGTCGAGCTGCTGGAAAGCCGCGCGCCCTTGCTCGGCGAACCGTTGGCGGCGGCGGCGATCGAC
TGGGTGACCAGCCTGACGGTGGCCGTCCTGCCCGAAGGACAGCCCTTTCCGGCCCTTTACATTGCGCTGTCAGCGGTGCT
GGAAGCGATCGGCGTTGCCCCATCGGCGCGGCAATGGGCGCTCGCGCTCGGCCGTTATGAACTGTTGCTGCTCGCCGAAC
TGGGGTTCGGCCTCGAAGACAAGCCCCGCGCGGCATCGAGTCCCTCCATGGCCGAAATGCTCGACTTCCTGTCGGTCACC
GGGCATTTCATCGACCGCGACCTTCTCGACGGGCGCAATCGTGCCTTGGCGGGCGTAAGGCAAAGATTGATCGACCGGCT
GGGTAGGGTGGTTGCCTGA

Upstream 100 bases:

>100_bases
AGACGCGCATTCGTACCGACGAGGGCGCCGACGTTGCGCTGGTGACGCAGACGCAGCTGGTGCTTTGGCCAGCCTGAGCG
CCGACGCCATCGTCTGCGCG

Downstream 100 bases:

>100_bases
ACTCCTGCCCCTGTCTAGAGCGACACCGTCAGACCAAGGCCGCACGCCCGTTCCGTTTGTGCCGAGCTTGTCGAAGCACC
GTCCCGTCACCGGACGGCGC

Product: recombinational DNA repair protein (RecF pathway)-like protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATVELLESRAPLLGEPLAAAAID
WVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWALALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVT
GHFIDRDLLDGRNRALAGVRQRLIDRLGRVVA

Sequences:

>Translated_192_residues
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATVELLESRAPLLGEPLAAAAID
WVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWALALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVT
GHFIDRDLLDGRNRALAGVRQRLIDRLGRVVA
>Mature_192_residues
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATVELLESRAPLLGEPLAAAAID
WVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWALALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVT
GHFIDRDLLDGRNRALAGVRQRLIDRLGRVVA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 20642; Mature: 20642

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHHHHHHHHCCHHH
ELLESRAPLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWA
HHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVTGHFIDRDLLDGRNRALAGVR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QRLIDRLGRVVA
HHHHHHHHHHCC
>Mature Secondary Structure
MRAHGEHGAILRALTHEAGLVAGYVRGGRSRRLRPILMPGNRVALELRSRTEEQLGGATV
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEHHHHHHHHHHCCHHH
ELLESRAPLLGEPLAAAAIDWVTSLTVAVLPEGQPFPALYIALSAVLEAIGVAPSARQWA
HHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LALGRYELLLLAELGFGLEDKPRAASSPSMAEMLDFLSVTGHFIDRDLLDGRNRALAGVR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QRLIDRLGRVVA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA