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The map label for this gene is yfmJ [H]

Identifier: 103486544

GI number: 103486544

Start: 1088368

End: 1089381

Strand: Reverse

Name: yfmJ [H]

Synonym: Sala_1055

Alternate gene names: 103486544

Gene position: 1089381-1088368 (Counterclockwise)

Preceding gene: 103486546

Following gene: 103486541

Centisome position: 32.57

GC content: 63.91

Gene sequence:

>1014_bases
ATGAAAGCCTGGCATCTGACCAGTCGTCCGCAGGGGCTGCCGACGATCGACAATTTCGCGCTCCGCGACCTGCCCGACAC
GCCGCTCGACAAAGATCAGCTCCGCGTGCGCAACCTCTGGCTCTCGGTTGATCCCTATATGCGCGGGCGGATGAACGACG
CCAAAAGCTATGCCGCGAGTTTCCAGCTCGACCAGCCGATGACGGGCGGCGCGATCGGCAAAGTTCTCGAAAGCCGGATG
GAGGGCTTCGCCCCCGGCGACCTCGTCCTCCACATGGGCGGCTGGCGCGAGGGCGGCGTGATCGGCCTCGACATGATGCC
GAACAAGCTGCCGACCGCCCTGCTCGACGCGGGGCTGCCACCGCAGACCTTCCTGCACAATATGGGCCTCACCGGCGGCA
CCGCGTGGATCGGACTGCTGCGCGTCGCTGCGGCGAAACCCGGCGATACCGTTTTCGTTTCGGCCTCCGCGGGCGCGGTC
GGATCGGCGGTGGTCCAGATCGCCAAGGCGCGCGAGATGACCGTGATCGGCTCGGCCGGTGGCGCCGAAAAATGCGCCTG
GGTGACCGAACTCGGCGCCGATGCCGCGATCGATTACAAGGCGGCGCCGGTCCTGCCCCAGCTCGCCGCCGCGCTCGAAC
GCCTCGGCAAACCCGGCATCGACGTCTATTTCGACAATGTCGGCGGCGAACATCTCGACGCCGCTTTTGCGACCGCGAAT
GATTTTGCGCGTTTCGCCATCTGCGGAATGATCGACGTCTATAACGACGCAAAGCCGCAGGAAATGAAATATCTCATCCG
CACCATTCCCGCGCGCATCCGCATGGAGGGTTTCATCTACACCGACCAGTTCATCGATTGCATGGAAGAATTCTACGCCG
ACATGAGCGGCCTGATCGCAAGCGGCGCGGTGACGATCCGCGAGACGGTACATGAGGGGATCGAAGCAGCGCCAGAGGCC
TTCCTCGGCCTCTTTTCGGGTGAGAATATCGGCAAGATGCTGGTGCGGGTCTAG

Upstream 100 bases:

>100_bases
CGACGGGCGGCGTCTTAACGGCACTGCCCGGCAGTGGCAACGGCTTTTCTGACCTTTGTCGTCGCCACGAAGTTTTTTCG
AGGAATGGGGGGGGATTCCG

Downstream 100 bases:

>100_bases
GTGTTTGGTCCCAGCATGTGATGGTTGGGTTTGACGATAAAGACATCGGGCTTTGATTTCCAGAGTTCCTCGATGGCTTC
ATATGGTGTCCTGAACTTGA

Product: zinc-binding alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKAWHLTSRPQGLPTIDNFALRDLPDTPLDKDQLRVRNLWLSVDPYMRGRMNDAKSYAASFQLDQPMTGGAIGKVLESRM
EGFAPGDLVLHMGGWREGGVIGLDMMPNKLPTALLDAGLPPQTFLHNMGLTGGTAWIGLLRVAAAKPGDTVFVSASAGAV
GSAVVQIAKAREMTVIGSAGGAEKCAWVTELGADAAIDYKAAPVLPQLAAALERLGKPGIDVYFDNVGGEHLDAAFATAN
DFARFAICGMIDVYNDAKPQEMKYLIRTIPARIRMEGFIYTDQFIDCMEEFYADMSGLIASGAVTIRETVHEGIEAAPEA
FLGLFSGENIGKMLVRV

Sequences:

>Translated_337_residues
MKAWHLTSRPQGLPTIDNFALRDLPDTPLDKDQLRVRNLWLSVDPYMRGRMNDAKSYAASFQLDQPMTGGAIGKVLESRM
EGFAPGDLVLHMGGWREGGVIGLDMMPNKLPTALLDAGLPPQTFLHNMGLTGGTAWIGLLRVAAAKPGDTVFVSASAGAV
GSAVVQIAKAREMTVIGSAGGAEKCAWVTELGADAAIDYKAAPVLPQLAAALERLGKPGIDVYFDNVGGEHLDAAFATAN
DFARFAICGMIDVYNDAKPQEMKYLIRTIPARIRMEGFIYTDQFIDCMEEFYADMSGLIASGAVTIRETVHEGIEAAPEA
FLGLFSGENIGKMLVRV
>Mature_337_residues
MKAWHLTSRPQGLPTIDNFALRDLPDTPLDKDQLRVRNLWLSVDPYMRGRMNDAKSYAASFQLDQPMTGGAIGKVLESRM
EGFAPGDLVLHMGGWREGGVIGLDMMPNKLPTALLDAGLPPQTFLHNMGLTGGTAWIGLLRVAAAKPGDTVFVSASAGAV
GSAVVQIAKAREMTVIGSAGGAEKCAWVTELGADAAIDYKAAPVLPQLAAALERLGKPGIDVYFDNVGGEHLDAAFATAN
DFARFAICGMIDVYNDAKPQEMKYLIRTIPARIRMEGFIYTDQFIDCMEEFYADMSGLIASGAVTIRETVHEGIEAAPEA
FLGLFSGENIGKMLVRV

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=337, Percent_Identity=34.4213649851632, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI226059133, Length=337, Percent_Identity=34.4213649851632, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI226246682, Length=349, Percent_Identity=35.8166189111748, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI226246680, Length=349, Percent_Identity=35.8166189111748, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI22748929, Length=349, Percent_Identity=35.8166189111748, Blast_Score=155, Evalue=4e-38,
Organism=Homo sapiens, GI226056130, Length=280, Percent_Identity=35.7142857142857, Blast_Score=148, Evalue=6e-36,
Organism=Homo sapiens, GI28557745, Length=222, Percent_Identity=26.1261261261261, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI226510941, Length=342, Percent_Identity=36.5497076023392, Blast_Score=218, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI133901712, Length=346, Percent_Identity=32.6589595375723, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI133901710, Length=346, Percent_Identity=32.6589595375723, Blast_Score=142, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6323504, Length=365, Percent_Identity=28.4931506849315, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36198; Mature: 36198

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAWHLTSRPQGLPTIDNFALRDLPDTPLDKDQLRVRNLWLSVDPYMRGRMNDAKSYAAS
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHEEEECHHHHCCCCHHHHHHHH
FQLDQPMTGGAIGKVLESRMEGFAPGDLVLHMGGWREGGVIGLDMMPNKLPTALLDAGLP
EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCC
PQTFLHNMGLTGGTAWIGLLRVAAAKPGDTVFVSASAGAVGSAVVQIAKAREMTVIGSAG
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEECCC
GAEKCAWVTELGADAAIDYKAAPVLPQLAAALERLGKPGIDVYFDNVGGEHLDAAFATAN
CCCHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
DFARFAICGMIDVYNDAKPQEMKYLIRTIPARIRMEGFIYTDQFIDCMEEFYADMSGLIA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHH
SGAVTIRETVHEGIEAAPEAFLGLFSGENIGKMLVRV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MKAWHLTSRPQGLPTIDNFALRDLPDTPLDKDQLRVRNLWLSVDPYMRGRMNDAKSYAAS
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHEEEECHHHHCCCCHHHHHHHH
FQLDQPMTGGAIGKVLESRMEGFAPGDLVLHMGGWREGGVIGLDMMPNKLPTALLDAGLP
EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCHHHHHHHHCCCC
PQTFLHNMGLTGGTAWIGLLRVAAAKPGDTVFVSASAGAVGSAVVQIAKAREMTVIGSAG
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEECCC
GAEKCAWVTELGADAAIDYKAAPVLPQLAAALERLGKPGIDVYFDNVGGEHLDAAFATAN
CCCHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
DFARFAICGMIDVYNDAKPQEMKYLIRTIPARIRMEGFIYTDQFIDCMEEFYADMSGLIA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHEEEEEEEHHHHHHHHHHHHHHHHHHHH
SGAVTIRETVHEGIEAAPEAFLGLFSGENIGKMLVRV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]