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The map label for this gene is ybdA [C]

Identifier: 103486535

GI number: 103486535

Start: 1078567

End: 1079880

Strand: Reverse

Name: ybdA [C]

Synonym: Sala_1046

Alternate gene names: 103486535

Gene position: 1079880-1078567 (Counterclockwise)

Preceding gene: 103486536

Following gene: 103486534

Centisome position: 32.28

GC content: 67.43

Gene sequence:

>1314_bases
ATGGCATCGATCCCTCCCCCCGAAGGCGAAGATCCGGTGATGCCGGAAGCGACGCCCCACGCCCCCTCGCCGCTCAGCTT
TCCCGACTTTCGCTATTATTGGTTTGCGCGTTTCACTGCGGTCATGGCGACCATCGCGATGGTCGTCGTCATCGGTTACC
AACTCTACGACACCGCGCGCTCCGACTATGGCATGTCGATCAAGGAGGCGTCGTTCCAGCTCGGGCTGCTCGGCCTTGTC
CAGTTCGTCCCACTCGCGCTGCTCACCCCCGTCGCCGGCTGGGCCGCCGACCGCTTCGAGCGGCGGCGCGTCGCGATCTT
CTCGAACCTCATCGACCTCCTCATCGCCGCAACGCTGGGCTGGTTTACCTGGGTCGACGGGCTGACGCTCTGGCTGCTTT
TTGCGCTCGCCGCATTGCACGGCGTCGCGCGCGTCTTTTCGGGTCCCGCAATGAGCGCGATCGCGCCGAATATCGTTCCG
CCCGCGGTCCTGCCGCGCGCCATCGCGATGAGCAGCATCGCATGGCAGTCGGCATCGGTGATCGGCCCGGCTGCGGGCGG
GCTCATCTACGCGGCGCACCCTGCGTCGGTCTATGTCTTTGCCGCCGTGCTCCTTGCCGTCTCGGCCATCACCCTGAGCC
GTGTGCGCCCGGTGCAGCCCCCGCCCGCCGCGGTCCGCCGCCATCCGCTGCGCGAGATGGTCGACGGGCTGCAATTCGTC
TGGATCGAACGCTTCCTGCTCGGCACGATCACGCTCGATTTGTTCGCGGTGCTGCTCGCCGGGGCGACCGCGATGTTTCC
CGTCTTCGCGCGCGACATATTGGACGCGGGGCCGGAGGGCGCCGGACTGATGCGCGCCGCCGTCGCCCTTGGTTCGGTCG
CGGTCGCGGTGGGCCTCGCGATCCGTCCGATCGAGCACAATGTCGGGGTCAAGATGCTGTGGGCGGTCGCGGTGTTCGGC
GCAACGACGGTCGCCTTCGGCTACTCGACAAGCCTCCTCCTCTCGCTCGCCCTGCTCGTCGTCATGGGTGCCGCCGACAT
GTTCTCGGTCTTCGTGCGCGGCACGCTGATTCAGCTCAACACGCCAGACCATATGCGCGGCCGCGTCAGCGCCGCATCGG
GCCTCGCCATCTCGGCCTCGAACGAGCTTGGCGAAATGCGCGCGGGTGCGATGGCCGCGGCACTGGGACCGGTCGGCGCG
GTGGTGATCGGCGGTGCTGGCGCGATCGGCGTGACGGCGCTATGGGCGTGGATATTTCCCGAACTGCGCCGCGCGCGTAC
CTTTGAACCTCAATTCAAGGCAGGATCGACATGA

Upstream 100 bases:

>100_bases
GCTGGTTGCCCGGACAAGCAGTGCGACAAAGTCCGAGACGCTTCCTGACGCAATCCCGGTGGGTCAGATATACAGCACGC
CGCTCTAGGGGGCAGGCGCG

Downstream 100 bases:

>100_bases
AAGCCAATTCCATCCTCGAAACCATCGGCAACACGCCGCACATTCGCATGGCAAAGCTTTTTCCCGACGCCGAAGTCTGG
GTAAAATCGGAACGCAGCAA

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; MFS Permease; Facilitator Superfamily Permease; Transmembrane Protein; Facilitator Superfamily Transporter; Transporter Facilitator Family; DrugProton Antiporter; MFS Family Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Facilitator Superfamily Transporter Permease; Permease Of Facilitator Superfamily; Permease Protein; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Macrolide-Efflux Protein; Membrame Protein; DrugH+ Antiporter; Facilitator Family Transporter

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MASIPPPEGEDPVMPEATPHAPSPLSFPDFRYYWFARFTAVMATIAMVVVIGYQLYDTARSDYGMSIKEASFQLGLLGLV
QFVPLALLTPVAGWAADRFERRRVAIFSNLIDLLIAATLGWFTWVDGLTLWLLFALAALHGVARVFSGPAMSAIAPNIVP
PAVLPRAIAMSSIAWQSASVIGPAAGGLIYAAHPASVYVFAAVLLAVSAITLSRVRPVQPPPAAVRRHPLREMVDGLQFV
WIERFLLGTITLDLFAVLLAGATAMFPVFARDILDAGPEGAGLMRAAVALGSVAVAVGLAIRPIEHNVGVKMLWAVAVFG
ATTVAFGYSTSLLLSLALLVVMGAADMFSVFVRGTLIQLNTPDHMRGRVSAASGLAISASNELGEMRAGAMAAALGPVGA
VVIGGAGAIGVTALWAWIFPELRRARTFEPQFKAGST

Sequences:

>Translated_437_residues
MASIPPPEGEDPVMPEATPHAPSPLSFPDFRYYWFARFTAVMATIAMVVVIGYQLYDTARSDYGMSIKEASFQLGLLGLV
QFVPLALLTPVAGWAADRFERRRVAIFSNLIDLLIAATLGWFTWVDGLTLWLLFALAALHGVARVFSGPAMSAIAPNIVP
PAVLPRAIAMSSIAWQSASVIGPAAGGLIYAAHPASVYVFAAVLLAVSAITLSRVRPVQPPPAAVRRHPLREMVDGLQFV
WIERFLLGTITLDLFAVLLAGATAMFPVFARDILDAGPEGAGLMRAAVALGSVAVAVGLAIRPIEHNVGVKMLWAVAVFG
ATTVAFGYSTSLLLSLALLVVMGAADMFSVFVRGTLIQLNTPDHMRGRVSAASGLAISASNELGEMRAGAMAAALGPVGA
VVIGGAGAIGVTALWAWIFPELRRARTFEPQFKAGST
>Mature_436_residues
ASIPPPEGEDPVMPEATPHAPSPLSFPDFRYYWFARFTAVMATIAMVVVIGYQLYDTARSDYGMSIKEASFQLGLLGLVQ
FVPLALLTPVAGWAADRFERRRVAIFSNLIDLLIAATLGWFTWVDGLTLWLLFALAALHGVARVFSGPAMSAIAPNIVPP
AVLPRAIAMSSIAWQSASVIGPAAGGLIYAAHPASVYVFAAVLLAVSAITLSRVRPVQPPPAAVRRHPLREMVDGLQFVW
IERFLLGTITLDLFAVLLAGATAMFPVFARDILDAGPEGAGLMRAAVALGSVAVAVGLAIRPIEHNVGVKMLWAVAVFGA
TTVAFGYSTSLLLSLALLVVMGAADMFSVFVRGTLIQLNTPDHMRGRVSAASGLAISASNELGEMRAGAMAAALGPVGAV
VIGGAGAIGVTALWAWIFPELRRARTFEPQFKAGST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46077; Mature: 45946

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIPPPEGEDPVMPEATPHAPSPLSFPDFRYYWFARFTAVMATIAMVVVIGYQLYDTAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDYGMSIKEASFQLGLLGLVQFVPLALLTPVAGWAADRFERRRVAIFSNLIDLLIAATLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFTWVDGLTLWLLFALAALHGVARVFSGPAMSAIAPNIVPPAVLPRAIAMSSIAWQSASV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
IGPAAGGLIYAAHPASVYVFAAVLLAVSAITLSRVRPVQPPPAAVRRHPLREMVDGLQFV
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHH
WIERFLLGTITLDLFAVLLAGATAMFPVFARDILDAGPEGAGLMRAAVALGSVAVAVGLA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IRPIEHNVGVKMLWAVAVFGATTVAFGYSTSLLLSLALLVVMGAADMFSVFVRGTLIQLN
HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
TPDHMRGRVSAASGLAISASNELGEMRAGAMAAALGPVGAVVIGGAGAIGVTALWAWIFP
CCHHHHCCHHHCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
ELRRARTFEPQFKAGST
HHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASIPPPEGEDPVMPEATPHAPSPLSFPDFRYYWFARFTAVMATIAMVVVIGYQLYDTAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA