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The map label for this gene is yvrB [H]

Identifier: 103486491

GI number: 103486491

Start: 1025076

End: 1026077

Strand: Reverse

Name: yvrB [H]

Synonym: Sala_1002

Alternate gene names: 103486491

Gene position: 1026077-1025076 (Counterclockwise)

Preceding gene: 103486492

Following gene: 103486490

Centisome position: 30.67

GC content: 71.76

Gene sequence:

>1002_bases
ATGAGCCGCGTCGCCCCGCCACGCTGGTCGCTGATGACCGGGCTTCTCGCGCTCACCCTCGCCGCGGCCCTGGCCTCGCT
GCTCTTCGGCCCGGTCGCGCTGTCGCCGGGCCGCCTCTTCGCCGCGGCGACGGGCGGCGACGACCGGATCGCCGCGATCA
TCCTGTTCGAGCTGCGCCTGCCGCGCACCTTGCTCGCGCTCGCCATCGGCGCGATGCTGGGGCTCGCGGGCGCGGCGTTG
CAAGGCTATTTGCGTAACCCGCTCGCCGAACCCTCGGTGCTCGGCACGTCGAACGCCGCGGCGCTCGGCGGCGTCGTCGC
GCTCTATTTCGGGCTGGCGGAATTGCATCCGGCGATGCTGCCCTTGCTCGCCACGGGCGGCGCGCTCGTCTCGCTGGCGC
TGCTCGTCATGCTCGCGGGCCAGGCCGAAAGCCCGCTGACCCTGATCCTCGCAGGCATCGCGGTCGGCGCGCTCGCGGTT
GCGGGGACCAGCCTCGCGCTCAACCTGTCGCCCAATCCCTTCGCGGCGATGGAAATCATGACCTGGCTGCTCGGCAGCCT
CGAAAATCGTTCCTTCGATCATCTGTGGATCGCGCTGCCGTGCATCGCGACCGGCATGGCGATGCTGCTGTGGAACGGCC
GCGCGCTCGATGCGCTGTCGCTGGGCGAGGATGCGGCGCAGGCGCTGGGCACCGACCTGAGGCGCACGCGGGCGCGGCTG
CTGCTCGGCACCGCGATCGGCGTCGGCGGCGCGGTCGCCGTGTCGGGCGCAATCGGCTTTATCGGGCTGATCGTCCCGCA
CCTCGTCCGTCCGCTCACCGACCGCAGCCCGTCGGCGATCCTGCTCCCCTCGGCGATCGGCGGCGCGGCGCTGCTGACGC
TTGCCGACATCGGTGTGCGCGTCATCCCGGCGACGAACGAGCTGAAACTCGGCGTCGTCACCGCCTTTCTGGGCGTGCCC
GTCTTCCTCGTCCACCTGATGCGCGAGCGGCGGCTGTGGTGA

Upstream 100 bases:

>100_bases
TTTCGGTCCCGCAGGCGTGGACGGTGTGCGGCGGCCCCGCCTATGCGCGCGCCGCGCAGAGCATCGCCGCGCAGATCGTC
CGGCACGACGGCGGCGGCGC

Downstream 100 bases:

>100_bases
CGCTGGCGCTCGATCGGGTCAGCGTCACGCTCGGCCGCCGCGCCGTGCTGCATGACGTCAGCACCGCCTTTGCGCCCGGC
ACACTGACCGCCATCGTCGG

Product: transport system permease protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSRVAPPRWSLMTGLLALTLAAALASLLFGPVALSPGRLFAAATGGDDRIAAIILFELRLPRTLLALAIGAMLGLAGAAL
QGYLRNPLAEPSVLGTSNAAALGGVVALYFGLAELHPAMLPLLATGGALVSLALLVMLAGQAESPLTLILAGIAVGALAV
AGTSLALNLSPNPFAAMEIMTWLLGSLENRSFDHLWIALPCIATGMAMLLWNGRALDALSLGEDAAQALGTDLRRTRARL
LLGTAIGVGGAVAVSGAIGFIGLIVPHLVRPLTDRSPSAILLPSAIGGAALLTLADIGVRVIPATNELKLGVVTAFLGVP
VFLVHLMRERRLW

Sequences:

>Translated_333_residues
MSRVAPPRWSLMTGLLALTLAAALASLLFGPVALSPGRLFAAATGGDDRIAAIILFELRLPRTLLALAIGAMLGLAGAAL
QGYLRNPLAEPSVLGTSNAAALGGVVALYFGLAELHPAMLPLLATGGALVSLALLVMLAGQAESPLTLILAGIAVGALAV
AGTSLALNLSPNPFAAMEIMTWLLGSLENRSFDHLWIALPCIATGMAMLLWNGRALDALSLGEDAAQALGTDLRRTRARL
LLGTAIGVGGAVAVSGAIGFIGLIVPHLVRPLTDRSPSAILLPSAIGGAALLTLADIGVRVIPATNELKLGVVTAFLGVP
VFLVHLMRERRLW
>Mature_332_residues
SRVAPPRWSLMTGLLALTLAAALASLLFGPVALSPGRLFAAATGGDDRIAAIILFELRLPRTLLALAIGAMLGLAGAALQ
GYLRNPLAEPSVLGTSNAAALGGVVALYFGLAELHPAMLPLLATGGALVSLALLVMLAGQAESPLTLILAGIAVGALAVA
GTSLALNLSPNPFAAMEIMTWLLGSLENRSFDHLWIALPCIATGMAMLLWNGRALDALSLGEDAAQALGTDLRRTRARLL
LGTAIGVGGAVAVSGAIGFIGLIVPHLVRPLTDRSPSAILLPSAIGGAALLTLADIGVRVIPATNELKLGVVTAFLGVPV
FLVHLMRERRLW

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=309, Percent_Identity=39.1585760517799, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1788004, Length=306, Percent_Identity=37.2549019607843, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786805, Length=312, Percent_Identity=37.5, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1790741, Length=278, Percent_Identity=36.3309352517986, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1786347, Length=334, Percent_Identity=32.6347305389222, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786804, Length=320, Percent_Identity=32.1875, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 34073; Mature: 33942

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVAPPRWSLMTGLLALTLAAALASLLFGPVALSPGRLFAAATGGDDRIAAIILFELRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEHHHC
PRTLLALAIGAMLGLAGAALQGYLRNPLAEPSVLGTSNAAALGGVVALYFGLAELHPAML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLLATGGALVSLALLVMLAGQAESPLTLILAGIAVGALAVAGTSLALNLSPNPFAAMEIM
HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
TWLLGSLENRSFDHLWIALPCIATGMAMLLWNGRALDALSLGEDAAQALGTDLRRTRARL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
LLGTAIGVGGAVAVSGAIGFIGLIVPHLVRPLTDRSPSAILLPSAIGGAALLTLADIGVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCEE
VIPATNELKLGVVTAFLGVPVFLVHLMRERRLW
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVAPPRWSLMTGLLALTLAAALASLLFGPVALSPGRLFAAATGGDDRIAAIILFELRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEHHHC
PRTLLALAIGAMLGLAGAALQGYLRNPLAEPSVLGTSNAAALGGVVALYFGLAELHPAML
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
PLLATGGALVSLALLVMLAGQAESPLTLILAGIAVGALAVAGTSLALNLSPNPFAAMEIM
HHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
TWLLGSLENRSFDHLWIALPCIATGMAMLLWNGRALDALSLGEDAAQALGTDLRRTRARL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH
LLGTAIGVGGAVAVSGAIGFIGLIVPHLVRPLTDRSPSAILLPSAIGGAALLTLADIGVR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCEE
VIPATNELKLGVVTAFLGVPVFLVHLMRERRLW
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]