| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486467
Identifier: 103486467
GI number: 103486467
Start: 1002509
End: 1002805
Strand: Reverse
Name: 103486467
Synonym: Sala_0978
Alternate gene names: NA
Gene position: 1002805-1002509 (Counterclockwise)
Preceding gene: 103486468
Following gene: 103486466
Centisome position: 29.98
GC content: 65.99
Gene sequence:
>297_bases ATGCAGAACGAAACCACCAATCTCTTCCGCCGCCGCGACACCTTTTTCGGTATCTGCGAGGCCGTGGGCCAGGATTTCGG CTTCAACCCGCTCTATCTGCGCCTGGCGTTCATCGCGCCGCTCTTTTTCTTCCCGGTGCAGAGCTTCGCCGCCTATTTCG GGCTCGGCCTCGTCGTGCTCGCCTCGCGCCTGCTCTTCCCGCCCAGCGAAGCACCGACGGTCGCCCCTGCGCGCGCCGTG ACCGGGGACGACGCGCAGCCAGCGCCGAAGGGTGAGGAACTCGCACTCGCAGCTTGA
Upstream 100 bases:
>100_bases ATCGCCCGGAAATCCGCACATCGGCATAATTGGCACGCCCCTTGCGAAGCATCGGGCACGAACGCGGGGCAGAGCCCGCA GCCAGAGGAAAGACGCAAAA
Downstream 100 bases:
>100_bases GCCGAAGCGGCCGGGTTCTCCCTCTCCCCGAGTCCGCCGCTTCGCTCCGATGGCGCGCTTTCCGCGTCATATAAGGGACC GTCGAGCCTCCCCCCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MQNETTNLFRRRDTFFGICEAVGQDFGFNPLYLRLAFIAPLFFFPVQSFAAYFGLGLVVLASRLLFPPSEAPTVAPARAV TGDDAQPAPKGEELALAA
Sequences:
>Translated_98_residues MQNETTNLFRRRDTFFGICEAVGQDFGFNPLYLRLAFIAPLFFFPVQSFAAYFGLGLVVLASRLLFPPSEAPTVAPARAV TGDDAQPAPKGEELALAA >Mature_98_residues MQNETTNLFRRRDTFFGICEAVGQDFGFNPLYLRLAFIAPLFFFPVQSFAAYFGLGLVVLASRLLFPPSEAPTVAPARAV TGDDAQPAPKGEELALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10656; Mature: 10656
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNETTNLFRRRDTFFGICEAVGQDFGFNPLYLRLAFIAPLFFFPVQSFAAYFGLGLVVL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRLLFPPSEAPTVAPARAVTGDDAQPAPKGEELALAA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC >Mature Secondary Structure MQNETTNLFRRRDTFFGICEAVGQDFGFNPLYLRLAFIAPLFFFPVQSFAAYFGLGLVVL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRLLFPPSEAPTVAPARAVTGDDAQPAPKGEELALAA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA