Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486451

Identifier: 103486451

GI number: 103486451

Start: 987824

End: 988057

Strand: Direct

Name: 103486451

Synonym: Sala_0961

Alternate gene names: NA

Gene position: 987824-988057 (Clockwise)

Preceding gene: 103486450

Following gene: 103486452

Centisome position: 29.53

GC content: 66.67

Gene sequence:

>234_bases
ATGCTTGAAATGCGACCCGATTGCGAACGCTGCGGACGCGATTTGCCCGCCGACATCCACGGTGCCTTCATCTGCTCGTT
CGAATGCACATTCTGCGCGAACTGCGCCGACAAGCTCGACGAGCGTTGCCCCAATTGCGGCGGCGACCTGCTCGACCGGC
CGCTGCGCGAGGGCGCGGCGCTGGCGAAGTTTCCGGCCTCGACGGAGCGGCGGCATCCGGGGGCCAGAGGTTAG

Upstream 100 bases:

>100_bases
AGGGCGACGATGCGGGCGAGGTCGAGCGTGTGGTCGACATGATCTGCGACGCGGTGCGCGCGGCCGTCTGATATTTTTAC
CTGACTGAAAGAGGCACGAT

Downstream 100 bases:

>100_bases
GTGCCGACGACCCCCCGCGTGCTGATCATCGCCGGATCGGACAGCGGCGGCGGAGCGGGAATCCAGGCCGATATCAAGGC
GGTGACGATGCTGGGCGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MLEMRPDCERCGRDLPADIHGAFICSFECTFCANCADKLDERCPNCGGDLLDRPLREGAALAKFPASTERRHPGARG

Sequences:

>Translated_77_residues
MLEMRPDCERCGRDLPADIHGAFICSFECTFCANCADKLDERCPNCGGDLLDRPLREGAALAKFPASTERRHPGARG
>Mature_77_residues
MLEMRPDCERCGRDLPADIHGAFICSFECTFCANCADKLDERCPNCGGDLLDRPLREGAALAKFPASTERRHPGARG

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 8456; Mature: 8456

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
13.0 %Cys+Met (Translated Protein)
10.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEMRPDCERCGRDLPADIHGAFICSFECTFCANCADKLDERCPNCGGDLLDRPLREGAA
CCCCCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCH
LAKFPASTERRHPGARG
HHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEMRPDCERCGRDLPADIHGAFICSFECTFCANCADKLDERCPNCGGDLLDRPLREGAA
CCCCCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCH
LAKFPASTERRHPGARG
HHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]