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The map label for this gene is ydjA [H]

Identifier: 103486443

GI number: 103486443

Start: 977924

End: 978505

Strand: Reverse

Name: ydjA [H]

Synonym: Sala_0953

Alternate gene names: 103486443

Gene position: 978505-977924 (Counterclockwise)

Preceding gene: 103486448

Following gene: 103486442

Centisome position: 29.25

GC content: 69.24

Gene sequence:

>582_bases
ATGTTCAACGACAACTCCTCGCTCCTCGCCCATCTCGCCACCCGCCGTTCGGGCAAGGCGCGCGACATGGTGGCGCCCGG
CCCCGACGCCGCGCAGCTCCGCGCCATCATCGAGCTTGCGCTGCGCACCCCCGACCATGGCAAGCTCGCCCCCTGGCGCA
TCGTCACCGTCGCCGACGACCAGCGCGCGGCTTTCGCGGCGCTGCTCAAGGAAGCGTGGGTCAAGGAGAATCCCGGCGCC
GCGGGCATGGATCTCTCCGCGCTCGATCAGTTCGCGCACCAGGCGCCCACCCTGCTCGTGCTGCTCTCCACCCCTGTGAA
GGGGGCCAAAATCCCGCTGTGGGAGCAACGGATGTCGGCGGGCGCGGTGGGCATGAACCTGCTCCACGCCGCGCACGCGC
ACGGCTTCGTCGGCAGCTGGCTCACCGGCTGGGCCGCCTACAGCCCCGACGTTGCCGCGGCGTTCGGCGCGGGCGAGGGC
GACACCATCGTTGGCTATTTCTTCCTCGGCACCGCGAACGCCCCGCTATCCGAACGACCAAGGCCCGAATATGACGAGGT
TGTTCGCGCCTGGGACATTTAA

Upstream 100 bases:

>100_bases
GAATCTAATTGCGCGCGAAACCATCGCGATCGGGCCGAAAACTGTTGCGAATCACTCGCAACACTTGCGCGGAGGCGCGC
CAAAGGCCACATGGCACGCC

Downstream 100 bases:

>100_bases
TGTCGCCGTTTGGCGAGTTGACGTAATAAGCGACATTTGACTGTGCTGCTGTCTTATGGCATTAAGTCGCCATGCTCGAT
CAGTCCAAACCCGTGTACCA

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MFNDNSSLLAHLATRRSGKARDMVAPGPDAAQLRAIIELALRTPDHGKLAPWRIVTVADDQRAAFAALLKEAWVKENPGA
AGMDLSALDQFAHQAPTLLVLLSTPVKGAKIPLWEQRMSAGAVGMNLLHAAHAHGFVGSWLTGWAAYSPDVAAAFGAGEG
DTIVGYFFLGTANAPLSERPRPEYDEVVRAWDI

Sequences:

>Translated_193_residues
MFNDNSSLLAHLATRRSGKARDMVAPGPDAAQLRAIIELALRTPDHGKLAPWRIVTVADDQRAAFAALLKEAWVKENPGA
AGMDLSALDQFAHQAPTLLVLLSTPVKGAKIPLWEQRMSAGAVGMNLLHAAHAHGFVGSWLTGWAAYSPDVAAAFGAGEG
DTIVGYFFLGTANAPLSERPRPEYDEVVRAWDI
>Mature_193_residues
MFNDNSSLLAHLATRRSGKARDMVAPGPDAAQLRAIIELALRTPDHGKLAPWRIVTVADDQRAAFAALLKEAWVKENPGA
AGMDLSALDQFAHQAPTLLVLLSTPVKGAKIPLWEQRMSAGAVGMNLLHAAHAHGFVGSWLTGWAAYSPDVAAAFGAGEG
DTIVGYFFLGTANAPLSERPRPEYDEVVRAWDI

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=166, Percent_Identity=36.7469879518072, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20650; Mature: 20650

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNDNSSLLAHLATRRSGKARDMVAPGPDAAQLRAIIELALRTPDHGKLAPWRIVTVADD
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
QRAAFAALLKEAWVKENPGAAGMDLSALDQFAHQAPTLLVLLSTPVKGAKIPLWEQRMSA
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHC
GAVGMNLLHAAHAHGFVGSWLTGWAAYSPDVAAAFGAGEGDTIVGYFFLGTANAPLSERP
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHEEECCCCCCEEEEEEEEECCCCCCCCCC
RPEYDEVVRAWDI
CCCHHHHHHHCCC
>Mature Secondary Structure
MFNDNSSLLAHLATRRSGKARDMVAPGPDAAQLRAIIELALRTPDHGKLAPWRIVTVADD
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
QRAAFAALLKEAWVKENPGAAGMDLSALDQFAHQAPTLLVLLSTPVKGAKIPLWEQRMSA
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHC
GAVGMNLLHAAHAHGFVGSWLTGWAAYSPDVAAAFGAGEGDTIVGYFFLGTANAPLSERP
CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHEEECCCCCCEEEEEEEEECCCCCCCCCC
RPEYDEVVRAWDI
CCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]