Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486429

Identifier: 103486429

GI number: 103486429

Start: 957623

End: 958267

Strand: Direct

Name: 103486429

Synonym: Sala_0939

Alternate gene names: NA

Gene position: 957623-958267 (Clockwise)

Preceding gene: 103486428

Following gene: 103486430

Centisome position: 28.63

GC content: 66.36

Gene sequence:

>645_bases
ATGGGTCGCACCATCTGGGTTTTGGCGGTGGCGCTCGGCGTCACCCTGGGCGCGTGCCGGGCCGTGGTGCCCGCTATACC
GCCATCGGCGGGTGATGCAGCGGAGGCGGGCGGAACGTGGCGCGCGACGGCGACCGATGCCGACAAGCAACGAATTCGCG
ACTGGTACGGCAGCTGGCAGGCCGCGCTCGCCGATGCGCGTGCGAAGGGACACGGCGCCGAAATCGACGATGAGGGGGCG
TTGCTCCAGCCAATGGCCGCGCTGCCCAACGCGCACCTGCCGGCGGGCGACTATCGTTGCCGGACGATCAAGATCGGCGC
GAAGGGGCGCGACGGGCTGGGCTTTATCGCCTATGGCTGGTTCCGCTGCCGCGTCACGGCCGAGCAAGGGCTATCGAGTC
TCACCAAGCTGACCGGGTCGCAGCGTCCCGTCGGACTGATCTTTCCCGACAATCTGAGGCGTCAGATTTTCCTCGGCACG
CTTGAGCTTGGCGATGAAAAAATGGCGATCAATTACGGCAGCGACCGGATGCGCGACATGGCGGGGCTGATCGAGCGGAT
CGGCGACAATCGCTGGCGGCTGGTGCTGCCCGCGCCGGCTTATGAATCGCTGCTCGACGTGATCGAGCTGGTTCCGGCAA
ATTGA

Upstream 100 bases:

>100_bases
CGTCGATGGCGGCTGGACCGCGGCCTGATGCGGCGGCCTTGAGCATTCTCCTTTGCCACCCTAAGGTTAACCAAACAGGG
CCGGGGAGAAACGGAGAATC

Downstream 100 bases:

>100_bases
TGGAGGAGAGAGGGATGATGCGCGCTTTCTGGATGGGCGCGGCGGCGCTGGCGCTGGCGGTGCCGGCATCGGCACAGACG
CTGCGCGGCGAGGTGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MGRTIWVLAVALGVTLGACRAVVPAIPPSAGDAAEAGGTWRATATDADKQRIRDWYGSWQAALADARAKGHGAEIDDEGA
LLQPMAALPNAHLPAGDYRCRTIKIGAKGRDGLGFIAYGWFRCRVTAEQGLSSLTKLTGSQRPVGLIFPDNLRRQIFLGT
LELGDEKMAINYGSDRMRDMAGLIERIGDNRWRLVLPAPAYESLLDVIELVPAN

Sequences:

>Translated_214_residues
MGRTIWVLAVALGVTLGACRAVVPAIPPSAGDAAEAGGTWRATATDADKQRIRDWYGSWQAALADARAKGHGAEIDDEGA
LLQPMAALPNAHLPAGDYRCRTIKIGAKGRDGLGFIAYGWFRCRVTAEQGLSSLTKLTGSQRPVGLIFPDNLRRQIFLGT
LELGDEKMAINYGSDRMRDMAGLIERIGDNRWRLVLPAPAYESLLDVIELVPAN
>Mature_213_residues
GRTIWVLAVALGVTLGACRAVVPAIPPSAGDAAEAGGTWRATATDADKQRIRDWYGSWQAALADARAKGHGAEIDDEGAL
LQPMAALPNAHLPAGDYRCRTIKIGAKGRDGLGFIAYGWFRCRVTAEQGLSSLTKLTGSQRPVGLIFPDNLRRQIFLGTL
ELGDEKMAINYGSDRMRDMAGLIERIGDNRWRLVLPAPAYESLLDVIELVPAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23071; Mature: 22940

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTIWVLAVALGVTLGACRAVVPAIPPSAGDAAEAGGTWRATATDADKQRIRDWYGSWQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEECCCHHHHHHHHHHCCHH
AALADARAKGHGAEIDDEGALLQPMAALPNAHLPAGDYRCRTIKIGAKGRDGLGFIAYGW
HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEE
FRCRVTAEQGLSSLTKLTGSQRPVGLIFPDNLRRQIFLGTLELGDEKMAINYGSDRMRDM
EEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCEEEEECCCHHHHHH
AGLIERIGDNRWRLVLPAPAYESLLDVIELVPAN
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRTIWVLAVALGVTLGACRAVVPAIPPSAGDAAEAGGTWRATATDADKQRIRDWYGSWQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEECCCHHHHHHHHHHCCHH
AALADARAKGHGAEIDDEGALLQPMAALPNAHLPAGDYRCRTIKIGAKGRDGLGFIAYGW
HHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEE
FRCRVTAEQGLSSLTKLTGSQRPVGLIFPDNLRRQIFLGTLELGDEKMAINYGSDRMRDM
EEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCEEEEECCCHHHHHH
AGLIERIGDNRWRLVLPAPAYESLLDVIELVPAN
HHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA