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The map label for this gene is ypfJ [H]

Identifier: 103486426

GI number: 103486426

Start: 954348

End: 955256

Strand: Reverse

Name: ypfJ [H]

Synonym: Sala_0936

Alternate gene names: 103486426

Gene position: 955256-954348 (Counterclockwise)

Preceding gene: 103486431

Following gene: 103486425

Centisome position: 28.56

GC content: 68.1

Gene sequence:

>909_bases
ATGCGCCTCGACGATTATGATCCCGGAGACGATATTCGCGATCTGGGCCGGGGCGGCGGCGGGTTCGGCGGGGGCGGCGG
CGGTCTTGGCGGGCTGCTGATCGGTTTCCTGCCGATGCTGCTCGGCCGCAAGATGGGATGCGGGACGATCCTGCTGCTCG
GCGCGGTCGCCTTTTTCCTGCTCGGCCCCGGCGCCAACATGCTGAGCATGGGCGGCGGCACCGCCGATCCCATGGCCGAC
AGCCGCGGCGCCCCGCAGGGCGTCGCCTGCGATACCGAGGCCGAGCGCTTTGCCTGCAACGTCTTCGGATCGACGCATCA
GGTGTGGGCCAGCCTGATCGACGGATATCGGCAGCCGACGCTCTACTTCTATTCCAATCGCGTGGACCGGACCGGCTGCG
GGTCCGCAAGCTCGGCCATGGGCCCCTTTTATTGCCCCGCCGATCAGGGCGTCTATCTCGACACCGACTTCTTCCGTGAG
CTCGACAGCAAGTTCGGCGCCGCGGGCGACGCCGCGCAGGCCTATGTCGTCGCACACGAAGTCGGCCATCATATCCAGAC
GATCAGCGGCATCGCAAATCAGGTGCGCCAGGCGCAGGCGCGCAGCTCGCAGGCCGAGGGCAACCAGCTTCAGGTCCGCA
TGGAACTTCAGGCCGATTGCTACGCCGGCGTCTGGGCGGCGCGGGCGCGCAACAGCGCGGGCCAGCCGGTGATGGAGCCG
GGCGACATGGAGGAAGCGATGCGCGCTGCCAATGCGATCGGCGACGACACGCTGATGCGCTCGGCGGGACAGCGTCCGGT
GCCCGAAAGCTTTACCCACGGGACGAGCGAGCAACGCATGACCTGGCTGCGCCGCGGCCTGCAAACGGGGGATCCGCGCC
AGTGCAACGCTTTCGACAGCGCCATCTGA

Upstream 100 bases:

>100_bases
GTCTCCTTATGGTAAGGGGATAATCGCCAAGCCCCTTCCAATTGCCCGATGCTGCTGTAACACTCGGGCCGAAACGATCC
TTCACCGGTGGAGAAGCCCG

Downstream 100 bases:

>100_bases
GCGCTGCGCTCGCGACAAGTCTTTTGGCGGCATCGCCGACGTCGGCCGAAAATCTCTATATCGAGGCCGGACGGCTGATC
GATGGCGTCTCCAGCGAGGT

Product: protein of unknown function, zinc metallopeptidase putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRLDDYDPGDDIRDLGRGGGGFGGGGGGLGGLLIGFLPMLLGRKMGCGTILLLGAVAFFLLGPGANMLSMGGGTADPMAD
SRGAPQGVACDTEAERFACNVFGSTHQVWASLIDGYRQPTLYFYSNRVDRTGCGSASSAMGPFYCPADQGVYLDTDFFRE
LDSKFGAAGDAAQAYVVAHEVGHHIQTISGIANQVRQAQARSSQAEGNQLQVRMELQADCYAGVWAARARNSAGQPVMEP
GDMEEAMRAANAIGDDTLMRSAGQRPVPESFTHGTSEQRMTWLRRGLQTGDPRQCNAFDSAI

Sequences:

>Translated_302_residues
MRLDDYDPGDDIRDLGRGGGGFGGGGGGLGGLLIGFLPMLLGRKMGCGTILLLGAVAFFLLGPGANMLSMGGGTADPMAD
SRGAPQGVACDTEAERFACNVFGSTHQVWASLIDGYRQPTLYFYSNRVDRTGCGSASSAMGPFYCPADQGVYLDTDFFRE
LDSKFGAAGDAAQAYVVAHEVGHHIQTISGIANQVRQAQARSSQAEGNQLQVRMELQADCYAGVWAARARNSAGQPVMEP
GDMEEAMRAANAIGDDTLMRSAGQRPVPESFTHGTSEQRMTWLRRGLQTGDPRQCNAFDSAI
>Mature_302_residues
MRLDDYDPGDDIRDLGRGGGGFGGGGGGLGGLLIGFLPMLLGRKMGCGTILLLGAVAFFLLGPGANMLSMGGGTADPMAD
SRGAPQGVACDTEAERFACNVFGSTHQVWASLIDGYRQPTLYFYSNRVDRTGCGSASSAMGPFYCPADQGVYLDTDFFRE
LDSKFGAAGDAAQAYVVAHEVGHHIQTISGIANQVRQAQARSSQAEGNQLQVRMELQADCYAGVWAARARNSAGQPVMEP
GDMEEAMRAANAIGDDTLMRSAGQRPVPESFTHGTSEQRMTWLRRGLQTGDPRQCNAFDSAI

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=233, Percent_Identity=47.6394849785408, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31965; Mature: 31965

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDDYDPGDDIRDLGRGGGGFGGGGGGLGGLLIGFLPMLLGRKMGCGTILLLGAVAFFL
CCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGPGANMLSMGGGTADPMADSRGAPQGVACDTEAERFACNVFGSTHQVWASLIDGYRQPT
HCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCE
LYFYSNRVDRTGCGSASSAMGPFYCPADQGVYLDTDFFRELDSKFGAAGDAAQAYVVAHE
EEEECCCCCCCCCCCCCCCCCCEECCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHH
VGHHIQTISGIANQVRQAQARSSQAEGNQLQVRMELQADCYAGVWAARARNSAGQPVMEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
GDMEEAMRAANAIGDDTLMRSAGQRPVPESFTHGTSEQRMTWLRRGLQTGDPRQCNAFDS
CCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHC
AI
CC
>Mature Secondary Structure
MRLDDYDPGDDIRDLGRGGGGFGGGGGGLGGLLIGFLPMLLGRKMGCGTILLLGAVAFFL
CCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LGPGANMLSMGGGTADPMADSRGAPQGVACDTEAERFACNVFGSTHQVWASLIDGYRQPT
HCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCE
LYFYSNRVDRTGCGSASSAMGPFYCPADQGVYLDTDFFRELDSKFGAAGDAAQAYVVAHE
EEEECCCCCCCCCCCCCCCCCCEECCCCCCEEECHHHHHHHHHHHCCCCCHHHHHHHHHH
VGHHIQTISGIANQVRQAQARSSQAEGNQLQVRMELQADCYAGVWAARARNSAGQPVMEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCC
GDMEEAMRAANAIGDDTLMRSAGQRPVPESFTHGTSEQRMTWLRRGLQTGDPRQCNAFDS
CCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHC
AI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]