Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486412

Identifier: 103486412

GI number: 103486412

Start: 935126

End: 936097

Strand: Reverse

Name: 103486412

Synonym: Sala_0922

Alternate gene names: NA

Gene position: 936097-935126 (Counterclockwise)

Preceding gene: 103486413

Following gene: 103486401

Centisome position: 27.98

GC content: 65.33

Gene sequence:

>972_bases
ATGGCCCTTCCCCCCGTTTTTGACCGCCTGCGCCTGCCGGTGATCGGCTCGCCGCTGTTCATCGTGTCGGGACCCGACCT
GGTGATTGCCCAGTGCAAGGCGGGGATCGTCGGGAGCTTTCCGGCGCTGAACGCGCGTCCGCAATCGCTGCTCGACGAAT
GGCTGCACCGTATCACCGAGGAACTGGCCGCGTGGGACCGCGACAATCCCGACCGCCCCTCGGCGCCCTATGCGGTCAAC
CAGATCGTCCACAAATCGAACGACCGGCTGGAAGCCGACATTGCGACCTGCGCCAAATGGAAGGTGCCGATTACCATCAC
TTCGCTCGGCGCGCGCGAAGAGCTCAACCAGGCGGTGCATGACTGGGGCGGCATCACGCTGCACGATGTCATCGACGACC
GCTTCGCGCGCAAGGCGATCGAAAAGGGCGCCGACGGGCTGATCCCCGTCGCCGCGGGCGCGGGCGGCCACGCCGGGCGG
CAATCCCCCTTCGCACTGATGCAGGAAATCCGCGAATGGTTCGATGGCCCGGTCGCCCTGTCGGGCGCGATCGGCCACGG
TCGCTCGATCCTCGCCGCGCAGGCCTGCGGCGCCGACCTCGCCTATATCGGCAGCGCCTTTATCGCGACTGCCGAAGCCA
ATGCAGACGAAGGGTACAAGAACGGCATTGTCGAGGGGCGTGCTGCCGACATCGTCTATTCGAACCTCTTTACCGGCGTG
CACGGCAATTACCTCCGCCAGTCGATCGTCGCCGCGGGCATGGACCCCGACAATCTTCCCGAAGGTGATCTGAAGACGAT
GAACTTCGGTTCGGGCGGCAACACCAAGGCGAAGGCGTGGAAGGACATTTGGGGGTCAGGGCAAGGTATCGGCGCCGTTT
CCGCGATACGCCCCGTCGCGGAGTTCGTCGCCGAGCTGGAAACGCAATATCTGGCAGCGCGCCGCGAGCTGGAGGCAAAG
GTCCGGCTTTAG

Upstream 100 bases:

>100_bases
GCAGCCGAGCGACTGGAAACAGCGCCGGTAGATCGATCCCTCTTGCGCCGCTTTCCGCTTACGTTAAGGTCAATTTCAAA
TCGCAACCGGAGAGTGATTC

Downstream 100 bases:

>100_bases
AGCGGCTTGCTGGACAACATCGGTGACGATGGAAATGCACCAGCCCCTCCTCGCGCCTCGCACTCGGCCAAAATCGCCTC
CGTCACGGTGGATCAATATC

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase Family Protein; Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase Family; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase-Like Protein; Trans-2-Enoyl-ACP Reductase II; 2-Nitropropane Dioxygenase Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MALPPVFDRLRLPVIGSPLFIVSGPDLVIAQCKAGIVGSFPALNARPQSLLDEWLHRITEELAAWDRDNPDRPSAPYAVN
QIVHKSNDRLEADIATCAKWKVPITITSLGAREELNQAVHDWGGITLHDVIDDRFARKAIEKGADGLIPVAAGAGGHAGR
QSPFALMQEIREWFDGPVALSGAIGHGRSILAAQACGADLAYIGSAFIATAEANADEGYKNGIVEGRAADIVYSNLFTGV
HGNYLRQSIVAAGMDPDNLPEGDLKTMNFGSGGNTKAKAWKDIWGSGQGIGAVSAIRPVAEFVAELETQYLAARRELEAK
VRL

Sequences:

>Translated_323_residues
MALPPVFDRLRLPVIGSPLFIVSGPDLVIAQCKAGIVGSFPALNARPQSLLDEWLHRITEELAAWDRDNPDRPSAPYAVN
QIVHKSNDRLEADIATCAKWKVPITITSLGAREELNQAVHDWGGITLHDVIDDRFARKAIEKGADGLIPVAAGAGGHAGR
QSPFALMQEIREWFDGPVALSGAIGHGRSILAAQACGADLAYIGSAFIATAEANADEGYKNGIVEGRAADIVYSNLFTGV
HGNYLRQSIVAAGMDPDNLPEGDLKTMNFGSGGNTKAKAWKDIWGSGQGIGAVSAIRPVAEFVAELETQYLAARRELEAK
VRL
>Mature_322_residues
ALPPVFDRLRLPVIGSPLFIVSGPDLVIAQCKAGIVGSFPALNARPQSLLDEWLHRITEELAAWDRDNPDRPSAPYAVNQ
IVHKSNDRLEADIATCAKWKVPITITSLGAREELNQAVHDWGGITLHDVIDDRFARKAIEKGADGLIPVAAGAGGHAGRQ
SPFALMQEIREWFDGPVALSGAIGHGRSILAAQACGADLAYIGSAFIATAEANADEGYKNGIVEGRAADIVYSNLFTGVH
GNYLRQSIVAAGMDPDNLPEGDLKTMNFGSGGNTKAKAWKDIWGSGQGIGAVSAIRPVAEFVAELETQYLAARRELEAKV
RL

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34496; Mature: 34365

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPPVFDRLRLPVIGSPLFIVSGPDLVIAQCKAGIVGSFPALNARPQSLLDEWLHRITE
CCCCCCHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ELAAWDRDNPDRPSAPYAVNQIVHKSNDRLEADIATCAKWKVPITITSLGAREELNQAVH
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
DWGGITLHDVIDDRFARKAIEKGADGLIPVAAGAGGHAGRQSPFALMQEIREWFDGPVAL
HCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEE
SGAIGHGRSILAAQACGADLAYIGSAFIATAEANADEGYKNGIVEGRAADIVYSNLFTGV
ECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHCCCCCCCHHHHHHHHHHHCC
HGNYLRQSIVAAGMDPDNLPEGDLKTMNFGSGGNTKAKAWKDIWGSGQGIGAVSAIRPVA
CHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
EFVAELETQYLAARRELEAKVRL
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALPPVFDRLRLPVIGSPLFIVSGPDLVIAQCKAGIVGSFPALNARPQSLLDEWLHRITE
CCCCCHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ELAAWDRDNPDRPSAPYAVNQIVHKSNDRLEADIATCAKWKVPITITSLGAREELNQAVH
HHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
DWGGITLHDVIDDRFARKAIEKGADGLIPVAAGAGGHAGRQSPFALMQEIREWFDGPVAL
HCCCEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEE
SGAIGHGRSILAAQACGADLAYIGSAFIATAEANADEGYKNGIVEGRAADIVYSNLFTGV
ECCCCCCCHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHCCCCCCCHHHHHHHHHHHCC
HGNYLRQSIVAAGMDPDNLPEGDLKTMNFGSGGNTKAKAWKDIWGSGQGIGAVSAIRPVA
CHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
EFVAELETQYLAARRELEAKVRL
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA