Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486411

Identifier: 103486411

GI number: 103486411

Start: 933804

End: 935012

Strand: Direct

Name: 103486411

Synonym: Sala_0921

Alternate gene names: NA

Gene position: 933804-935012 (Clockwise)

Preceding gene: 103486410

Following gene: 103486418

Centisome position: 27.91

GC content: 62.28

Gene sequence:

>1209_bases
ATGGATGATCCCGCGCCGCATCGGCACCAGTCGCTCGCTTTCATGCTGCTCTATGCCTTGGCGGTAGCTGGCGGAAGCAT
GGCCTATGTCCCGTTCCTGACCATCCTGCTTCCGTCGCGGATTGCGGTGCTGGCAGGGTCGGCCGACGTCGAATGGCTCG
GGTTGCTGACATTCGCGGGGGCCATTGCGGCCAGTGTTGGCGGAATCCTGTTCGGTTGGCTCAGCGACATCACGAACAGT
CGGCGATGGTGGATATTGTCGGGGCTGGTCCTGACAGTCGCGCTGCTCCTTGCCGTCCCGCTGGCGGACGATCTGTGGAC
ACTCGTGTCGATCATCATTTGCTGGCAGCTCGCGCTCAACATGGTCCTTGGCCCCCTTGCAGCGTGGGGCGGCGACCTCG
TTCCCGACGATCAGAAGGGTCTGCTGGGCGGCCTTCTCGCCTTCGCGCCCGCGCTTGGCGCCTGGTCGGGGGCGCTCGTC
ACGCTGCCCGTTCTCGAGACGTTCGAATCCCGACTTTTCGCGCTTGCGTTTCTGGTGGTGGCCGCCGTCACACCGGCGAC
GGTTTTTGCACGCCCCAGACGCCTCGAGATGCTCGGGCGCGCACCATCGCTGGATCGCGATGGACGGATCGGGACCCTGT
CAAAGGGACCGGCCGTGCGGATGTGGTTCGCCCGCTTTCTGGTCCAGATTTCCGAAGCGGCGTTATTCGCCTATCTCTAT
TTCTGGTTTCGCTCGATTGACCCGGACATGGGCGATAACGAAAAGGCGCGGCTGTTCAGTCTTGCCCTCACCATTGCGAT
ACCCATCGCCCTTTACTGTGGCCGCTGGTCCGATCGCAATGACCGTCCATTTCTGCCGCTTGTGATCAGCAGCGCGGTTT
CGGCGGCCGGGATGCTCGGTATGGCGCTCGCTGCCTCGGCCGACCTCGCCAAGCTCGCCTATCTTCTTTTCGGTATCGCA
ACCACCGTTTTTCTCGCCTTGCATGCTGGTCAGACGCTTCGAATTCTGCCGCGTTCGGATCGCCGTGGACGCGATCTAGG
GGTTTTCAATCTGACCAACACGCTCCCTTCGCTGATTATGCCGCTGCTGACGATCTCGGTCGTCCCGGGCTTCGGTTTCG
AGACGCTGTTTCTGGTGCTCGCGACGCTTGCCATTCTTGCGACGTTGATCCTGACGACAATTCCGCGTCCCAGTCCCGGT
CGCGCCTAG

Upstream 100 bases:

>100_bases
GAAATGATCATCAAGGCGCAGCGGGGGGAAAAGTTGCCGCCACAACCCGTGATTGTTGCCGGGGGCTTCGTCGAACGCGA
ATCGACTTCTGCGCCCGCGC

Downstream 100 bases:

>100_bases
AGCGCGATGACATGATATTGATCCACCGTGACGGAGGCGATTTTGGCCGAGTGCGAGGCGCGAGGAGGGGCTGGTGCATT
TCCATCGTCACCGATGTTGT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDDPAPHRHQSLAFMLLYALAVAGGSMAYVPFLTILLPSRIAVLAGSADVEWLGLLTFAGAIAASVGGILFGWLSDITNS
RRWWILSGLVLTVALLLAVPLADDLWTLVSIIICWQLALNMVLGPLAAWGGDLVPDDQKGLLGGLLAFAPALGAWSGALV
TLPVLETFESRLFALAFLVVAAVTPATVFARPRRLEMLGRAPSLDRDGRIGTLSKGPAVRMWFARFLVQISEAALFAYLY
FWFRSIDPDMGDNEKARLFSLALTIAIPIALYCGRWSDRNDRPFLPLVISSAVSAAGMLGMALAASADLAKLAYLLFGIA
TTVFLALHAGQTLRILPRSDRRGRDLGVFNLTNTLPSLIMPLLTISVVPGFGFETLFLVLATLAILATLILTTIPRPSPG
RA

Sequences:

>Translated_402_residues
MDDPAPHRHQSLAFMLLYALAVAGGSMAYVPFLTILLPSRIAVLAGSADVEWLGLLTFAGAIAASVGGILFGWLSDITNS
RRWWILSGLVLTVALLLAVPLADDLWTLVSIIICWQLALNMVLGPLAAWGGDLVPDDQKGLLGGLLAFAPALGAWSGALV
TLPVLETFESRLFALAFLVVAAVTPATVFARPRRLEMLGRAPSLDRDGRIGTLSKGPAVRMWFARFLVQISEAALFAYLY
FWFRSIDPDMGDNEKARLFSLALTIAIPIALYCGRWSDRNDRPFLPLVISSAVSAAGMLGMALAASADLAKLAYLLFGIA
TTVFLALHAGQTLRILPRSDRRGRDLGVFNLTNTLPSLIMPLLTISVVPGFGFETLFLVLATLAILATLILTTIPRPSPG
RA
>Mature_402_residues
MDDPAPHRHQSLAFMLLYALAVAGGSMAYVPFLTILLPSRIAVLAGSADVEWLGLLTFAGAIAASVGGILFGWLSDITNS
RRWWILSGLVLTVALLLAVPLADDLWTLVSIIICWQLALNMVLGPLAAWGGDLVPDDQKGLLGGLLAFAPALGAWSGALV
TLPVLETFESRLFALAFLVVAAVTPATVFARPRRLEMLGRAPSLDRDGRIGTLSKGPAVRMWFARFLVQISEAALFAYLY
FWFRSIDPDMGDNEKARLFSLALTIAIPIALYCGRWSDRNDRPFLPLVISSAVSAAGMLGMALAASADLAKLAYLLFGIA
TTVFLALHAGQTLRILPRSDRRGRDLGVFNLTNTLPSLIMPLLTISVVPGFGFETLFLVLATLAILATLILTTIPRPSPG
RA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43139; Mature: 43139

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDPAPHRHQSLAFMLLYALAVAGGSMAYVPFLTILLPSRIAVLAGSADVEWLGLLTFAG
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
AIAASVGGILFGWLSDITNSRRWWILSGLVLTVALLLAVPLADDLWTLVSIIICWQLALN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MVLGPLAAWGGDLVPDDQKGLLGGLLAFAPALGAWSGALVTLPVLETFESRLFALAFLVV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAVTPATVFARPRRLEMLGRAPSLDRDGRIGTLSKGPAVRMWFARFLVQISEAALFAYLY
HHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FWFRSIDPDMGDNEKARLFSLALTIAIPIALYCGRWSDRNDRPFLPLVISSAVSAAGMLG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
MALAASADLAKLAYLLFGIATTVFLALHAGQTLRILPRSDRRGRDLGVFNLTNTLPSLIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHH
PLLTISVVPGFGFETLFLVLATLAILATLILTTIPRPSPGRA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDDPAPHRHQSLAFMLLYALAVAGGSMAYVPFLTILLPSRIAVLAGSADVEWLGLLTFAG
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
AIAASVGGILFGWLSDITNSRRWWILSGLVLTVALLLAVPLADDLWTLVSIIICWQLALN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
MVLGPLAAWGGDLVPDDQKGLLGGLLAFAPALGAWSGALVTLPVLETFESRLFALAFLVV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AAVTPATVFARPRRLEMLGRAPSLDRDGRIGTLSKGPAVRMWFARFLVQISEAALFAYLY
HHHCCHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FWFRSIDPDMGDNEKARLFSLALTIAIPIALYCGRWSDRNDRPFLPLVISSAVSAAGMLG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
MALAASADLAKLAYLLFGIATTVFLALHAGQTLRILPRSDRRGRDLGVFNLTNTLPSLIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHH
PLLTISVVPGFGFETLFLVLATLAILATLILTTIPRPSPGRA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA