| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is CYP127A1 [H]
Identifier: 103486393
GI number: 103486393
Start: 912284
End: 913561
Strand: Reverse
Name: CYP127A1 [H]
Synonym: Sala_0903
Alternate gene names: 103486393
Gene position: 913561-912284 (Counterclockwise)
Preceding gene: 103486394
Following gene: 103486392
Centisome position: 27.31
GC content: 62.52
Gene sequence:
>1278_bases ATGACCAGTCTAGCCGAACGCTGTCCGGTGGCACGGGCGGGCGCCGATGCCCCGCCCGCCCCCGCGCATGTCCCGCCCGA CCTTGTGCTCGACACCCGCTTCGCGGCGGGCATCGTCCCCAACGACCTGGCCGAGCCCTATCGCCCGATGGACGTGGTGC GCGACGAGGCCTTTCCGCGCATCCATTATTATCCCTGGCCGATCAGCGGCAACCGGCACGGCGCGTGGGTCGTGACCCGA TATGAGGATATTCGCCGCGTCTATGAGGATAACGAGCTTTTCTCCTCCGAAGGCGTCGCCCAGTTCCAGGCACTGGCCGG CGAAACCTTTCCGTCGATCCCGCTTGGCATCGACCCGCCCGATCATGGCCGTTACCGCAAGTTCCTGAACCCCTGGTTCA CCCCCGTTGCGATGAATGCGCGCGAACCGCGCATCCGCGAGATCATCGGCGGGATGATCGACCAGTTCGCCGACAGGGGC GAGGTCGATATTGCTTATGATTTCGGGCGCGTGTTCCCGGTGCGCGTCTTTCTGGATCTGATGGGTTTCCCCTTCACCAT GTTCGACCAGTTCCTCGACTGGGAGTTCGCCATTCTGCACGACGACCGGATCGACAAGAAGGTGGAGGCGCTGACAGCTG TGCTGGCCTATCTACGCGGCTTCATCGCCGACAAGCAGGCCAGCCCGGATGCCAATCTGGGCAGCTATATCGCCAATGGT TCGATCGACGGCGTCCCGCTCACCGACGATGAAAAGATCGGCATAACCTGGTTCCTGTGGCTGGGCGGCCTCGATACCGT CGCCTCGACGGTCAGCCAGATGTTCCGCCGTTTCGCAATGCACCCGCAGCTTCAGAAACGGATCCGCGAGGACAAGTCGC TGATCAACTCTGCCGTCGAGGAGTTTCTCCGCACCCAGCCGCTCGTCAATTCGGGGCGCAAGGTGAAGCGCGATTTCGAA TGGCACGGCGTACAGATCAAGGCCGGTGACTGGGTGACGGCATTCAACACATCTGGGAACTTTGATCCCCAACAGTTTGA ATGTCCCCATCAATTCGACCCGGAGCGCAGGAACAACCGCCACTTCACATTGGCTGGCGGGGTGCACATCTGTCTGGGCG CGCATCTGGCGCGGCGGGAGCTTCGCGTGCTCCTCGACGAATGGTTCACCCGTATCCCGTACGAGTTCCGCGTGCGCGAG GGCGCGGATACGACGGTGGTGCCCAGCCTGTTGTCGATCCGCAATCTGCCCATCGTTTGGGACTGCAAGGCCGCCTGA
Upstream 100 bases:
>100_bases TCTGGGCGGGCTGAAAACCGAGAGCATGGACGCGATCGGCAAGGCCAAGCGCCCGGTGACGTCGGGCGACATCGAACGCA TGTTCGCATCGGCCTGAACG
Downstream 100 bases:
>100_bases CAAGGAAATAGGAATGCCATTTCTGAAATATGCCGACGCCATCTATGTGGGCGGCGAATGGGAGAAGACCGATCGGCGCG AGGCGGTGATCAACCCCGCG
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTSLAERCPVARAGADAPPAPAHVPPDLVLDTRFAAGIVPNDLAEPYRPMDVVRDEAFPRIHYYPWPISGNRHGAWVVTR YEDIRRVYEDNELFSSEGVAQFQALAGETFPSIPLGIDPPDHGRYRKFLNPWFTPVAMNAREPRIREIIGGMIDQFADRG EVDIAYDFGRVFPVRVFLDLMGFPFTMFDQFLDWEFAILHDDRIDKKVEALTAVLAYLRGFIADKQASPDANLGSYIANG SIDGVPLTDDEKIGITWFLWLGGLDTVASTVSQMFRRFAMHPQLQKRIREDKSLINSAVEEFLRTQPLVNSGRKVKRDFE WHGVQIKAGDWVTAFNTSGNFDPQQFECPHQFDPERRNNRHFTLAGGVHICLGAHLARRELRVLLDEWFTRIPYEFRVRE GADTTVVPSLLSIRNLPIVWDCKAA
Sequences:
>Translated_425_residues MTSLAERCPVARAGADAPPAPAHVPPDLVLDTRFAAGIVPNDLAEPYRPMDVVRDEAFPRIHYYPWPISGNRHGAWVVTR YEDIRRVYEDNELFSSEGVAQFQALAGETFPSIPLGIDPPDHGRYRKFLNPWFTPVAMNAREPRIREIIGGMIDQFADRG EVDIAYDFGRVFPVRVFLDLMGFPFTMFDQFLDWEFAILHDDRIDKKVEALTAVLAYLRGFIADKQASPDANLGSYIANG SIDGVPLTDDEKIGITWFLWLGGLDTVASTVSQMFRRFAMHPQLQKRIREDKSLINSAVEEFLRTQPLVNSGRKVKRDFE WHGVQIKAGDWVTAFNTSGNFDPQQFECPHQFDPERRNNRHFTLAGGVHICLGAHLARRELRVLLDEWFTRIPYEFRVRE GADTTVVPSLLSIRNLPIVWDCKAA >Mature_424_residues TSLAERCPVARAGADAPPAPAHVPPDLVLDTRFAAGIVPNDLAEPYRPMDVVRDEAFPRIHYYPWPISGNRHGAWVVTRY EDIRRVYEDNELFSSEGVAQFQALAGETFPSIPLGIDPPDHGRYRKFLNPWFTPVAMNAREPRIREIIGGMIDQFADRGE VDIAYDFGRVFPVRVFLDLMGFPFTMFDQFLDWEFAILHDDRIDKKVEALTAVLAYLRGFIADKQASPDANLGSYIANGS IDGVPLTDDEKIGITWFLWLGGLDTVASTVSQMFRRFAMHPQLQKRIREDKSLINSAVEEFLRTQPLVNSGRKVKRDFEW HGVQIKAGDWVTAFNTSGNFDPQQFECPHQFDPERRNNRHFTLAGGVHICLGAHLARRELRVLLDEWFTRIPYEFRVREG ADTTVVPSLLSIRNLPIVWDCKAA
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 48373; Mature: 48242
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLAERCPVARAGADAPPAPAHVPPDLVLDTRFAAGIVPNDLAEPYRPMDVVRDEAFPR CCCHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCHHHHCCCCCHHHHHHCCCCE IHYYPWPISGNRHGAWVVTRYEDIRRVYEDNELFSSEGVAQFQALAGETFPSIPLGIDPP EEEEECCCCCCCCCCEEEECHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCC DHGRYRKFLNPWFTPVAMNAREPRIREIIGGMIDQFADRGEVDIAYDFGRVFPVRVFLDL CCCHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH MGFPFTMFDQFLDWEFAILHDDRIDKKVEALTAVLAYLRGFIADKQASPDANLGSYIANG HCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC SIDGVPLTDDEKIGITWFLWLGGLDTVASTVSQMFRRFAMHPQLQKRIREDKSLINSAVE CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EFLRTQPLVNSGRKVKRDFEWHGVQIKAGDWVTAFNTSGNFDPQQFECPHQFDPERRNNR HHHHHCCHHHCCCHHHCCCCCCCEEEECCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCC HFTLAGGVHICLGAHLARRELRVLLDEWFTRIPYEFRVREGADTTVVPSLLSIRNLPIVW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEE DCKAA ECCCC >Mature Secondary Structure TSLAERCPVARAGADAPPAPAHVPPDLVLDTRFAAGIVPNDLAEPYRPMDVVRDEAFPR CCHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCHHHHCCCCCHHHHHHCCCCE IHYYPWPISGNRHGAWVVTRYEDIRRVYEDNELFSSEGVAQFQALAGETFPSIPLGIDPP EEEEECCCCCCCCCCEEEECHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCC DHGRYRKFLNPWFTPVAMNAREPRIREIIGGMIDQFADRGEVDIAYDFGRVFPVRVFLDL CCCHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH MGFPFTMFDQFLDWEFAILHDDRIDKKVEALTAVLAYLRGFIADKQASPDANLGSYIANG HCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC SIDGVPLTDDEKIGITWFLWLGGLDTVASTVSQMFRRFAMHPQLQKRIREDKSLINSAVE CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EFLRTQPLVNSGRKVKRDFEWHGVQIKAGDWVTAFNTSGNFDPQQFECPHQFDPERRNNR HHHHHCCHHHCCCHHHCCCCCCCEEEECCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCC HFTLAGGVHICLGAHLARRELRVLLDEWFTRIPYEFRVREGADTTVVPSLLSIRNLPIVW EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCEEE DCKAA ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]