Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486354

Identifier: 103486354

GI number: 103486354

Start: 871212

End: 872072

Strand: Reverse

Name: 103486354

Synonym: Sala_0864

Alternate gene names: NA

Gene position: 872072-871212 (Counterclockwise)

Preceding gene: 103486360

Following gene: 103486353

Centisome position: 26.07

GC content: 64.46

Gene sequence:

>861_bases
ATGGAAATCGTTGCGGATGGCCTTGCCTTTCCGGAGGGACCGGTGGTCATGGCCGATGGGTCGGTGATCGTCGTCGAGCT
TGCGGGCGGGCGTATCACGCGCTGCTGGAACGGCCGCAAGGAAGTGCTGTGCGAGATCGGCGGCGGGCCCAATGGCGCCG
CGATCGGTCCCGATGGCGCGCTATATGTTTGCAACAATGGCGGACTGGATCTCGACAAGTTTCAGAATGCCCGCGGTCCG
GGCCATGAGGGCCGGGTCGAGCGAGTGGACCTGTCGAGCGGTCGCGCCGAACGGCTTTTCGACCATTGCGACGGTGTGGC
GCTGGAGGCGCCGAACGACATTGTTTTCGACTCGGACGGGCGCATGTGGTTCACCGACCTTGGCAAGACGCATGACGGCA
TCCGCACGGCGAGCGGGCTGTTCACGGCGCTTCCCGACGGTTCGCATGTCGCCGCGATCGACCGCCACGCCATCTCCTGC
AACGGCATCGGCCTGTCGCCCAATGGGGCGCATGTCTATGTCGCCGACACCCATCAGGCGCGCCTTTGGCGCTACCGGCG
GGCCCCCGAAGAACAGAGGCCCGAATGGGTGGCAACCGCTCCGGGGCCGGTAGGTTTCGACAGTCTGGCGGTAACGGCCG
CCGGCAATATCTGTGTCGCAACGCTTTACGAGGGCGGCATTTCGACCATCACGTCCGACGGCGCAATGCACAAGTTCGGC
ATTCCGGGCGAACGTTACGTTACCAACATTGCCTTCGGCGGCACAGACATGCGGGACGCCTATGTAACGCTGTCGAGTTC
GGGGCGGCTCGCGAAACTGCGCTGGGACGAGCCGGGACTGGAGCTTGCATTCAATGCCTGA

Upstream 100 bases:

>100_bases
GATGGGCCGGTATTGGCAAGGCTCTCTCCCTCGCGCCAAGGGTTGCGCCTTGACCCTCTGCATGTCAAGACATGACTAAC
TAGGTTATATAGGAGCCGAC

Downstream 100 bases:

>100_bases
TCTGGCAAGCGACCGCGACGCGATCCGCGACCTTCTGGCACGCTATACCTACCACGGCGACCGGGGGCGTATCGACGATC
TGGCGGCCTGCTTTGCGCCC

Product: gluconolactonase, putative

Products: NA

Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Antibiotic Induced Protein Drp; Gluconolactonase Protein; Glconolactonase; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MEIVADGLAFPEGPVVMADGSVIVVELAGGRITRCWNGRKEVLCEIGGGPNGAAIGPDGALYVCNNGGLDLDKFQNARGP
GHEGRVERVDLSSGRAERLFDHCDGVALEAPNDIVFDSDGRMWFTDLGKTHDGIRTASGLFTALPDGSHVAAIDRHAISC
NGIGLSPNGAHVYVADTHQARLWRYRRAPEEQRPEWVATAPGPVGFDSLAVTAAGNICVATLYEGGISTITSDGAMHKFG
IPGERYVTNIAFGGTDMRDAYVTLSSSGRLAKLRWDEPGLELAFNA

Sequences:

>Translated_286_residues
MEIVADGLAFPEGPVVMADGSVIVVELAGGRITRCWNGRKEVLCEIGGGPNGAAIGPDGALYVCNNGGLDLDKFQNARGP
GHEGRVERVDLSSGRAERLFDHCDGVALEAPNDIVFDSDGRMWFTDLGKTHDGIRTASGLFTALPDGSHVAAIDRHAISC
NGIGLSPNGAHVYVADTHQARLWRYRRAPEEQRPEWVATAPGPVGFDSLAVTAAGNICVATLYEGGISTITSDGAMHKFG
IPGERYVTNIAFGGTDMRDAYVTLSSSGRLAKLRWDEPGLELAFNA
>Mature_286_residues
MEIVADGLAFPEGPVVMADGSVIVVELAGGRITRCWNGRKEVLCEIGGGPNGAAIGPDGALYVCNNGGLDLDKFQNARGP
GHEGRVERVDLSSGRAERLFDHCDGVALEAPNDIVFDSDGRMWFTDLGKTHDGIRTASGLFTALPDGSHVAAIDRHAISC
NGIGLSPNGAHVYVADTHQARLWRYRRAPEEQRPEWVATAPGPVGFDSLAVTAAGNICVATLYEGGISTITSDGAMHKFG
IPGERYVTNIAFGGTDMRDAYVTLSSSGRLAKLRWDEPGLELAFNA

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30308; Mature: 30308

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVADGLAFPEGPVVMADGSVIVVELAGGRITRCWNGRKEVLCEIGGGPNGAAIGPDGA
CCEEECCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCCCE
LYVCNNGGLDLDKFQNARGPGHEGRVERVDLSSGRAERLFDHCDGVALEAPNDIVFDSDG
EEEECCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEECCCCEEECCCC
RMWFTDLGKTHDGIRTASGLFTALPDGSHVAAIDRHAISCNGIGLSPNGAHVYVADTHQA
CEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCEEEECCCCCCCCCCEEEEEECCHH
RLWRYRRAPEEQRPEWVATAPGPVGFDSLAVTAAGNICVATLYEGGISTITSDGAMHKFG
HHHHHHCCCHHHCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCEEECC
IPGERYVTNIAFGGTDMRDAYVTLSSSGRLAKLRWDEPGLELAFNA
CCCHHEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECC
>Mature Secondary Structure
MEIVADGLAFPEGPVVMADGSVIVVELAGGRITRCWNGRKEVLCEIGGGPNGAAIGPDGA
CCEEECCCCCCCCCEEEECCCEEEEEECCCEEEEEECCCEEEEEEECCCCCCCEECCCCE
LYVCNNGGLDLDKFQNARGPGHEGRVERVDLSSGRAERLFDHCDGVALEAPNDIVFDSDG
EEEECCCCCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEECCCCEEECCCC
RMWFTDLGKTHDGIRTASGLFTALPDGSHVAAIDRHAISCNGIGLSPNGAHVYVADTHQA
CEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECCEEEECCCCCCCCCCEEEEEECCHH
RLWRYRRAPEEQRPEWVATAPGPVGFDSLAVTAAGNICVATLYEGGISTITSDGAMHKFG
HHHHHHCCCHHHCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCEEECC
IPGERYVTNIAFGGTDMRDAYVTLSSSGRLAKLRWDEPGLELAFNA
CCCHHEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA