Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486310

Identifier: 103486310

GI number: 103486310

Start: 823687

End: 823947

Strand: Direct

Name: 103486310

Synonym: Sala_0819

Alternate gene names: NA

Gene position: 823687-823947 (Clockwise)

Preceding gene: 103486309

Following gene: 103486318

Centisome position: 24.62

GC content: 65.52

Gene sequence:

>261_bases
GTGATCGTCGATGTCGAAGCGACGACCTCGGTCCGCCAGGCCGAGATGACCGCCCAACGCAGGATGATCGAGCGAACGCA
GGAGCGCTTCGGCATCTGGCCCGAGCGGCTAGAGCGCGATGACATGATATTGATCCACCGTGACGGAGGCGATTTTGGCC
GAGTGCGAGGCGCGAGGAGCGGCGCGATGCGGGACATCGCGCCCGACGAGCAACGTGGCAATCGGCAAAAATCGACCCGC
CCCGGAGGGGTTGCCCCCTGA

Upstream 100 bases:

>100_bases
GATCAACCTTACCGACCCTGCGTCGCGCTGGACCGCGGCCACGCGCGAGGCGGCGTTCTACTCCTACAGCACCAACTAGC
TGATCGACCTCGACCACGCT

Downstream 100 bases:

>100_bases
AGCCCGCCGGACAGCGGCGCGTCTCTGGACCGGGCAACCAGCCCGTCCTGCGAGACGCTTCTTGCCGACGAACTTCAGGG
GGCAATCACGGTGGGTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: IS4 Family Transposase

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR
PGGVAP

Sequences:

>Translated_86_residues
MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR
PGGVAP
>Mature_86_residues
MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR
PGGVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9794; Mature: 9794

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARS
CEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHCCCCC
GAMRDIAPDEQRGNRQKSTRPGGVAP
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARS
CEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHCCCCC
GAMRDIAPDEQRGNRQKSTRPGGVAP
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA