| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486310
Identifier: 103486310
GI number: 103486310
Start: 823687
End: 823947
Strand: Direct
Name: 103486310
Synonym: Sala_0819
Alternate gene names: NA
Gene position: 823687-823947 (Clockwise)
Preceding gene: 103486309
Following gene: 103486318
Centisome position: 24.62
GC content: 65.52
Gene sequence:
>261_bases GTGATCGTCGATGTCGAAGCGACGACCTCGGTCCGCCAGGCCGAGATGACCGCCCAACGCAGGATGATCGAGCGAACGCA GGAGCGCTTCGGCATCTGGCCCGAGCGGCTAGAGCGCGATGACATGATATTGATCCACCGTGACGGAGGCGATTTTGGCC GAGTGCGAGGCGCGAGGAGCGGCGCGATGCGGGACATCGCGCCCGACGAGCAACGTGGCAATCGGCAAAAATCGACCCGC CCCGGAGGGGTTGCCCCCTGA
Upstream 100 bases:
>100_bases GATCAACCTTACCGACCCTGCGTCGCGCTGGACCGCGGCCACGCGCGAGGCGGCGTTCTACTCCTACAGCACCAACTAGC TGATCGACCTCGACCACGCT
Downstream 100 bases:
>100_bases AGCCCGCCGGACAGCGGCGCGTCTCTGGACCGGGCAACCAGCCCGTCCTGCGAGACGCTTCTTGCCGACGAACTTCAGGG GGCAATCACGGTGGGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: IS4 Family Transposase
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR PGGVAP
Sequences:
>Translated_86_residues MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR PGGVAP >Mature_86_residues MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARSGAMRDIAPDEQRGNRQKSTR PGGVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9794; Mature: 9794
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARS CEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHCCCCC GAMRDIAPDEQRGNRQKSTRPGGVAP CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVDVEATTSVRQAEMTAQRRMIERTQERFGIWPERLERDDMILIHRDGGDFGRVRGARS CEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCHHHCCCCC GAMRDIAPDEQRGNRQKSTRPGGVAP CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA