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The map label for this gene is rpiB [H]

Identifier: 103486284

GI number: 103486284

Start: 798357

End: 798809

Strand: Reverse

Name: rpiB [H]

Synonym: Sala_0792

Alternate gene names: 103486284

Gene position: 798809-798357 (Counterclockwise)

Preceding gene: 103486285

Following gene: 103486283

Centisome position: 23.88

GC content: 67.11

Gene sequence:

>453_bases
ATGCGCATCGCCATCGCCGCCGACCACGCCGCCTATGAACTGAAAGCCCTGCTCGCCGACTGGCTGCGCGAAAAGGGACA
CGAGGTCGAGGATCTGGGCACCAACGGCCCCGACAGCGTCGATTATCCCGATTATGGCTATCGGCTGGGCGGTGCGATCG
CCGACGGCCGCGCCGACCGCGGCGTTGCCCTGTGCGGATCGGGCATCGGCATCTCGATCTCGGTCAACCGCAACCCCGCC
GCGCGCTGCGCTTTGGTGTCCGAGCCGCTGTCGGCGAAGCTGGCGCGCGAGCATAATGACGCGAACGTGATCGCCATGGG
TGCGCGCCTCACGGGTATCGACATGGCCAAGGCGTGCCTCGACGCTTTCCTGACCACCGATTTCGCCGGCGACCGCCACG
CGCGCCGCGTCGACAAACTCTCTAACCCGCCGCAACTGGAGACCAGCCGATGA

Upstream 100 bases:

>100_bases
CCGGCGGCGTCACAAATTTGCCACCTCGCTTATGGCAAAGTCCGGCGCCTTCGCCTAAAGCGCGCTCATCGATTCCCTTA
TGCCCCGCGGGAGCCGCACC

Downstream 100 bases:

>100_bases
CCACCGAAACGCTAGACAAGCCCATCAAATCGGCCGGCTATTTCACCGATGGTGTCGCCATCGTCGACCCCGCGGTCGCG
GCGGCGATGACCCGCGAACT

Product: RpiB/LacA/LacB family sugar-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRIAIAADHAAYELKALLADWLREKGHEVEDLGTNGPDSVDYPDYGYRLGGAIADGRADRGVALCGSGIGISISVNRNPA
ARCALVSEPLSAKLAREHNDANVIAMGARLTGIDMAKACLDAFLTTDFAGDRHARRVDKLSNPPQLETSR

Sequences:

>Translated_150_residues
MRIAIAADHAAYELKALLADWLREKGHEVEDLGTNGPDSVDYPDYGYRLGGAIADGRADRGVALCGSGIGISISVNRNPA
ARCALVSEPLSAKLAREHNDANVIAMGARLTGIDMAKACLDAFLTTDFAGDRHARRVDKLSNPPQLETSR
>Mature_150_residues
MRIAIAADHAAYELKALLADWLREKGHEVEDLGTNGPDSVDYPDYGYRLGGAIADGRADRGVALCGSGIGISISVNRNPA
ARCALVSEPLSAKLAREHNDANVIAMGARLTGIDMAKACLDAFLTTDFAGDRHARRVDKLSNPPQLETSR

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=144, Percent_Identity=40.9722222222222, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15988; Mature: 15988

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIAADHAAYELKALLADWLREKGHEVEDLGTNGPDSVDYPDYGYRLGGAIADGRADR
CEEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCEEECCEEECCCCCC
GVALCGSGIGISISVNRNPAARCALVSEPLSAKLAREHNDANVIAMGARLTGIDMAKACL
CEEEECCCCEEEEEECCCCCHHEEECCCCHHHHHHHCCCCCCEEEECCEECCHHHHHHHH
DAFLTTDFAGDRHARRVDKLSNPPQLETSR
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRIAIAADHAAYELKALLADWLREKGHEVEDLGTNGPDSVDYPDYGYRLGGAIADGRADR
CEEEEECCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCEEECCEEECCCCCC
GVALCGSGIGISISVNRNPAARCALVSEPLSAKLAREHNDANVIAMGARLTGIDMAKACL
CEEEECCCCEEEEEECCCCCHHEEECCCCHHHHHHHCCCCCCEEEECCEECCHHHHHHHH
DAFLTTDFAGDRHARRVDKLSNPPQLETSR
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]