| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486279
Identifier: 103486279
GI number: 103486279
Start: 795195
End: 795602
Strand: Direct
Name: 103486279
Synonym: Sala_0787
Alternate gene names: NA
Gene position: 795195-795602 (Clockwise)
Preceding gene: 103486277
Following gene: 103486286
Centisome position: 23.77
GC content: 67.16
Gene sequence:
>408_bases TTGCGAAGGCGCGCGGTTAGACGGGACGCGTCGCAAAGTCAAGCGCTGCGCCCGCGCTCGACAGTGGCGAAAAAGCCGCT AAAGGCTGCGCGCATGACGACCGCCAAACCTCCCGATCAATGCGAATCCATGGCCGATGTCCGCGCCGGGGTCGATGCGG TCGATCGCGACCTCGTCGCGCTGCTGGTTCGCCGCTTCGCCTATATGGACGCCGCGGCGCGGATCAAGACCGACCGCGGC ACCGTCCGCGACGAAGCGCGCAAGGCGGAAGTGCTCGACAATGTCGCGCGCGCGGCCGAAGCCGCGGGACTGGAACCCGC GCGGCTGCGCGCGGTGTGGAACGAGCTGGTCGAACAATCAATCGCCTATGAGGCGGTTCAGTGGGATCGCCTGCGCGCCG ATAACTGA
Upstream 100 bases:
>100_bases CTCCAATTTGCTGTTTGCCGAGGGATTTCGGCGGTTCCCGGGTCGCACCGCACGGGCCGGGCCGTGCGCGACCACCGCTT CACCGGGGTGCGGGGTCAAT
Downstream 100 bases:
>100_bases GCGGTTTTCGCTTCAGCGCGTTCTTGGCGCCCGGCCAAGAGCCACAATGATTCCGTGCATCATCCGGATGTCGTTGTGCG ACCAGCCCGTCTTGGTGAGC
Product: chorismate mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN
Sequences:
>Translated_135_residues MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN >Mature_135_residues MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15101; Mature: 15101
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLVRRFAYMDAAARIKTDRGTVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IAYEAVQWDRLRADN HHHHHHHHHHHCCCC >Mature Secondary Structure MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLVRRFAYMDAAARIKTDRGTVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IAYEAVQWDRLRADN HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA