Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486279

Identifier: 103486279

GI number: 103486279

Start: 795195

End: 795602

Strand: Direct

Name: 103486279

Synonym: Sala_0787

Alternate gene names: NA

Gene position: 795195-795602 (Clockwise)

Preceding gene: 103486277

Following gene: 103486286

Centisome position: 23.77

GC content: 67.16

Gene sequence:

>408_bases
TTGCGAAGGCGCGCGGTTAGACGGGACGCGTCGCAAAGTCAAGCGCTGCGCCCGCGCTCGACAGTGGCGAAAAAGCCGCT
AAAGGCTGCGCGCATGACGACCGCCAAACCTCCCGATCAATGCGAATCCATGGCCGATGTCCGCGCCGGGGTCGATGCGG
TCGATCGCGACCTCGTCGCGCTGCTGGTTCGCCGCTTCGCCTATATGGACGCCGCGGCGCGGATCAAGACCGACCGCGGC
ACCGTCCGCGACGAAGCGCGCAAGGCGGAAGTGCTCGACAATGTCGCGCGCGCGGCCGAAGCCGCGGGACTGGAACCCGC
GCGGCTGCGCGCGGTGTGGAACGAGCTGGTCGAACAATCAATCGCCTATGAGGCGGTTCAGTGGGATCGCCTGCGCGCCG
ATAACTGA

Upstream 100 bases:

>100_bases
CTCCAATTTGCTGTTTGCCGAGGGATTTCGGCGGTTCCCGGGTCGCACCGCACGGGCCGGGCCGTGCGCGACCACCGCTT
CACCGGGGTGCGGGGTCAAT

Downstream 100 bases:

>100_bases
GCGGTTTTCGCTTCAGCGCGTTCTTGGCGCCCGGCCAAGAGCCACAATGATTCCGTGCATCATCCGGATGTCGTTGTGCG
ACCAGCCCGTCTTGGTGAGC

Product: chorismate mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG
TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN

Sequences:

>Translated_135_residues
MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG
TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN
>Mature_135_residues
MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVALLVRRFAYMDAAARIKTDRG
TVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQSIAYEAVQWDRLRADN

Specific function: Unknown

COG id: COG1605

COG function: function code E; Chorismate mutase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15101; Mature: 15101

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLVRRFAYMDAAARIKTDRGTVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IAYEAVQWDRLRADN
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRRAVRRDASQSQALRPRSTVAKKPLKAARMTTAKPPDQCESMADVRAGVDAVDRDLVA
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLVRRFAYMDAAARIKTDRGTVRDEARKAEVLDNVARAAEAAGLEPARLRAVWNELVEQS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
IAYEAVQWDRLRADN
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA