Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is gal [H]

Identifier: 103486237

GI number: 103486237

Start: 752340

End: 753260

Strand: Direct

Name: gal [H]

Synonym: Sala_0745

Alternate gene names: 103486237

Gene position: 752340-753260 (Clockwise)

Preceding gene: 103486236

Following gene: 103486238

Centisome position: 22.49

GC content: 59.83

Gene sequence:

>921_bases
GTGACCCTCCGCATTGCGCTGATCGGCTTCGGCAAAATCGCGGAAGACCAGCATCTCCCGGCCATCGCTGCCAACCCCGA
TTTCGAACTCGCGGCGATCGTTTCGCTCAACCGTCCCAGCCATATTCGATGTCCCGTCTTTTCCACGGTTGGCGACATGT
TTGCGGGCCTGCCAGGGGGCATCGACGCCGTCGCCATTTGCACCCCGCCAGTTCCGCGCTTTGCAATTGCGTGCGAGGTC
ATCACTGCGGGTCTCCCCGTGCTGTTCGAAAAGCCGCCCACCGCCACCCTGGGGGAACTCGACTATCTGATTGCGCTTGC
CCGCTTGCGAAACGTTCCGATCTTTACAGCTTGGCATTCGCAATATGCAGCCGGCGTGCCGGTCGCCGCGCGGGCCCTGA
AAGGGGAGGCCGTTACAAGTCTTACAATGCTGTGGCGCGAAGATGTCCGCAAATATCATCCCGGACAGCAATGGATATGG
CAGCCAGGAGGGTTTGGCGTGTTCGATCCCGCGATCAATGGTTTTTCGATCCTCAACAACATCCTGGACGAGCCGCTCCT
GGTCAACCGGGTATCGATGCTGTTCCCGGCAAACCGGCAAACGCCCATTTCGGCCGAAGTTCTTTTCCATGGAGACGATC
GCAAAGCCATACTGGACTGGCGTGGCGGGGATGAAGATGAATGGAAGATCCAGATTGAAACGGCGTCGGGCAAGTCGGTT
CGCCTGATGGAAGGGGGCGCTCAACTCGAGATCGACGGCGCGCCGCGAAGTTTGCCGCCGCGCAGCGAATATCGCGCCAT
CTATGAGGATTTCGCCGACGTCGTGCGTCGCCGGTGCAGCAAGATCGATCGGGATCCGCTGCGTATCGTTGCTGACTGCT
TTCTGGCCGCCGAACGAAATGCGGGGGACGATTTTGCCTGA

Upstream 100 bases:

>100_bases
TTGGCCTTGGCGGTGCTCTCTATCGCGCGGGCGACACAGTGACTCAGGTTCATCAACGCGCGGCCCGGTTTGTGGCTACG
CTCAAACCGGGGGCGCGCCA

Downstream 100 bases:

>100_bases
AATTGGCCCTCCCTTTCAATGTTTTCGGTTGTATGCATGTCCGCGAAGAGCTGGAGGGCAGTTGAGTGACTGAGCAAACG
GGATTGAACACGTCGTCGGC

Product: D-galactose 1-dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTLRIALIGFGKIAEDQHLPAIAANPDFELAAIVSLNRPSHIRCPVFSTVGDMFAGLPGGIDAVAICTPPVPRFAIACEV
ITAGLPVLFEKPPTATLGELDYLIALARLRNVPIFTAWHSQYAAGVPVAARALKGEAVTSLTMLWREDVRKYHPGQQWIW
QPGGFGVFDPAINGFSILNNILDEPLLVNRVSMLFPANRQTPISAEVLFHGDDRKAILDWRGGDEDEWKIQIETASGKSV
RLMEGGAQLEIDGAPRSLPPRSEYRAIYEDFADVVRRRCSKIDRDPLRIVADCFLAAERNAGDDFA

Sequences:

>Translated_306_residues
MTLRIALIGFGKIAEDQHLPAIAANPDFELAAIVSLNRPSHIRCPVFSTVGDMFAGLPGGIDAVAICTPPVPRFAIACEV
ITAGLPVLFEKPPTATLGELDYLIALARLRNVPIFTAWHSQYAAGVPVAARALKGEAVTSLTMLWREDVRKYHPGQQWIW
QPGGFGVFDPAINGFSILNNILDEPLLVNRVSMLFPANRQTPISAEVLFHGDDRKAILDWRGGDEDEWKIQIETASGKSV
RLMEGGAQLEIDGAPRSLPPRSEYRAIYEDFADVVRRRCSKIDRDPLRIVADCFLAAERNAGDDFA
>Mature_305_residues
TLRIALIGFGKIAEDQHLPAIAANPDFELAAIVSLNRPSHIRCPVFSTVGDMFAGLPGGIDAVAICTPPVPRFAIACEVI
TAGLPVLFEKPPTATLGELDYLIALARLRNVPIFTAWHSQYAAGVPVAARALKGEAVTSLTMLWREDVRKYHPGQQWIWQ
PGGFGVFDPAINGFSILNNILDEPLLVNRVSMLFPANRQTPISAEVLFHGDDRKAILDWRGGDEDEWKIQIETASGKSVR
LMEGGAQLEIDGAPRSLPPRSEYRAIYEDFADVVRRRCSKIDRDPLRIVADCFLAAERNAGDDFA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: =1.1.1.48 [H]

Molecular weight: Translated: 33585; Mature: 33454

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIALIGFGKIAEDQHLPAIAANPDFELAAIVSLNRPSHIRCPVFSTVGDMFAGLPGG
CEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEECCHHHHHHHHHHCCCCC
IDAVAICTPPVPRFAIACEVITAGLPVLFEKPPTATLGELDYLIALARLRNVPIFTAWHS
CCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
QYAAGVPVAARALKGEAVTSLTMLWREDVRKYHPGQQWIWQPGGFGVFDPAINGFSILNN
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHH
ILDEPLLVNRVSMLFPANRQTPISAEVLFHGDDRKAILDWRGGDEDEWKIQIETASGKSV
HHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCEE
RLMEGGAQLEIDGAPRSLPPRSEYRAIYEDFADVVRRRCSKIDRDPLRIVADCFLAAERN
EEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
AGDDFA
CCCCCC
>Mature Secondary Structure 
TLRIALIGFGKIAEDQHLPAIAANPDFELAAIVSLNRPSHIRCPVFSTVGDMFAGLPGG
EEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEECCHHHHHHHHHHCCCCC
IDAVAICTPPVPRFAIACEVITAGLPVLFEKPPTATLGELDYLIALARLRNVPIFTAWHS
CCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
QYAAGVPVAARALKGEAVTSLTMLWREDVRKYHPGQQWIWQPGGFGVFDPAINGFSILNN
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHH
ILDEPLLVNRVSMLFPANRQTPISAEVLFHGDDRKAILDWRGGDEDEWKIQIETASGKSV
HHCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCEE
RLMEGGAQLEIDGAPRSLPPRSEYRAIYEDFADVVRRRCSKIDRDPLRIVADCFLAAERN
EEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
AGDDFA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2503815 [H]