Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is argC [H]

Identifier: 103486204

GI number: 103486204

Start: 715661

End: 716596

Strand: Reverse

Name: argC [H]

Synonym: Sala_0711

Alternate gene names: 103486204

Gene position: 716596-715661 (Counterclockwise)

Preceding gene: 103486205

Following gene: 103486202

Centisome position: 21.42

GC content: 68.48

Gene sequence:

>936_bases
ATGGTCCAGAGCATCTTCATCGACGGCGCCGCGGGGACGACGGGCCTTGAAATTGCCGAGCGGCTCGCAGGGCGACGTGA
ATTCGCGCTGATCGCGCTCGACGCGGCCCGCCGCAAGGATGCCGCGGCGCGGCGCGAAGCCCTGAACGACGCCGATTTCG
TGATCCTCTGCCTGCCCGACGATGCGGCGCGCGAGGCGGTGGCGATGATCGACAACGACCGGACCCGCGTGATCGACGCT
TCGACCGCGCACCGCGTCGCGCCGGGCTGGACCTATGGTTTTCCCGAAGTCGTCGGGCATGATGCGGTGGCTGCGGCGGC
ACGCGTGTCAAACCCCGGCTGCTATTCGACCGGGTTCATCGCGCTCGTCGCGCCGCTGGTGCGCGCAGGCCTTCTGCCCG
CCGACTGGCCCTATATCTGCCACGCGGTCAGCGGCTATTCGGGCGGCGGCAAGGCGCTGATCGAACGCTTTGAGGGTGAC
CGCGACATCGCCTGGCGCGGCTATGCGCTTGCCCTCGGTCACAAGCATGTGCCCGAAATGCAGATGCACTGCGGCCTGTC
GGTTGCGCCGCTCTTTTCGCCCGCGGTGATCCCGGCGCATCGCGGGATGGTGGTCGAAGTGCCGCTGCCGCTCGGTGCCA
TGCCCCGCGCCGCCGCACCCGATGCGCTGCGCGCCGCGCTCGCCGACTTTTACGGCGCGAGCCCAATCGTCGCCATGGGC
GATATGCCTGCGGACGGCGAAATGCTGCTGCGCGCGTCGGATGCGCGGGATGACCGCATCGAACTATTCGTCTTCTCCAA
TGCTGACGCCGACCAGGCGCGGCTCGTCGCGCGGCTCGACAATCTGGGCAAGGGCGCCAGCGGCGCGTGCGTCCAGAACC
TCAATATCATGGCCGGATTGCCCGAAACCGCGGGGCTGCGGATTCAGGCTCAGTGA

Upstream 100 bases:

>100_bases
GGAACGAGGTGCGCGCCGAACCGCTTGCCGACCTGATCGCTCGGACGAGAGCCGAGGGGCACGAGGAGCCGGTGAGCGGC
GCAAAGCGGCTTCACTAGCC

Downstream 100 bases:

>100_bases
ACTGTGTCGAGGACGTCGTCGACCGACAGATAGGTGATCAGCCGCTCGATCTGCCGCCAGCGCGCGAAATGGACATGGTT
GCCCAACGCCCGATATTGTT

Product: N-acetyl-gamma-glutamyl-phosphate reductase

Products: NA

Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA
STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD
RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG
DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ

Sequences:

>Translated_311_residues
MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA
STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD
RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG
DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ
>Mature_311_residues
MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPDDAAREAVAMIDNDRTRVIDA
STAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFIALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGD
RDIAWRGYALALGHKHVPEMQMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG
DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGLPETAGLRIQAQ

Specific function: Arginine biosynthesis; third step. [C]

COG id: COG0002

COG function: function code E; Acetylglutamate semialdehyde dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAGSA dehydrogenase family. Type 2 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320913, Length=275, Percent_Identity=30.1818181818182, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010136
- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: =1.2.1.38 [H]

Molecular weight: Translated: 32806; Mature: 32806

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00285 POTATO_INHIBITOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPD
CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCC
DAAREAVAMIDNDRTRVIDASTAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFI
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHH
ALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGDRDIAWRGYALALGHKHVPEM
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCEEEEECCCCCCCH
QMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG
HHHCCCEEHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEC
DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGL
CCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEECC
PETAGLRIQAQ
CCCCCEEEEEC
>Mature Secondary Structure
MVQSIFIDGAAGTTGLEIAERLAGRREFALIALDAARRKDAAARREALNDADFVILCLPD
CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCC
DAAREAVAMIDNDRTRVIDASTAHRVAPGWTYGFPEVVGHDAVAAAARVSNPGCYSTGFI
HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCCHHH
ALVAPLVRAGLLPADWPYICHAVSGYSGGGKALIERFEGDRDIAWRGYALALGHKHVPEM
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCEEEEECCCCCCCH
QMHCGLSVAPLFSPAVIPAHRGMVVEVPLPLGAMPRAAAPDALRAALADFYGASPIVAMG
HHHCCCEEHHCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEC
DMPADGEMLLRASDARDDRIELFVFSNADADQARLVARLDNLGKGASGACVQNLNIMAGL
CCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCEEEECC
PETAGLRIQAQ
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA