| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103486189
Identifier: 103486189
GI number: 103486189
Start: 703112
End: 703558
Strand: Direct
Name: 103486189
Synonym: Sala_0696
Alternate gene names: NA
Gene position: 703112-703558 (Clockwise)
Preceding gene: 103486188
Following gene: 103486190
Centisome position: 21.02
GC content: 68.46
Gene sequence:
>447_bases ATGGGCAAATATGACCCGCTCGGCGAGCATCTTCGGGCGCTACCCGGCGATCGATGGAATGCGAGTTTTGCCGAGATCGA GCGCATTTTGGGCTTCCGTTTGCCGAGTAGCGCGCGCGAGCACCGCGCCTGGTGGGCCAATCACAGCGGCGGTAATCACA GCCAGGCCGCGGCGTGGGTGAAAGCCGGATGGGAAACGCGCGACGTCGATCAGAAACGCGAGCGCATCGGGTTCGAGCGG GTGCGGTCGCAGGGACAGGCGGCTCAGCAACCGGCGGCCGATTTGTGGGCCGAAGCCGCGCGTATCACCGGCATCAGGGA TCGCGGCGAGCTGGAGCGGGCGGCTGCCAGCGCGCTTATCCAGCGCGAGGCGGCACGAAAGCTGGCGTTGATGGGCGGTA GCGACCCCGGCGCGACAGCGGCGCCGCGCGAGCGATCCGGCGCGTGA
Upstream 100 bases:
>100_bases GGCGGTTTCGGCGGTAGTGCGCTTGATATAGTAACATTACTATATTTTGTATGGACACAGCGTAGATATAGTATATGTTC CTATCCGAAAGGAGCGAGTC
Downstream 100 bases:
>100_bases TCCTGATCGACAGTTCGGTCTGGATCGATCATCTGCGCAGCGCCAATGCGGGGCTTGCGCTGGCGCTTGCCGAAGGCCGC ATCGTTCAGCACCCATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MGKYDPLGEHLRALPGDRWNASFAEIERILGFRLPSSAREHRAWWANHSGGNHSQAAAWVKAGWETRDVDQKRERIGFER VRSQGQAAQQPAADLWAEAARITGIRDRGELERAAASALIQREAARKLALMGGSDPGATAAPRERSGA
Sequences:
>Translated_148_residues MGKYDPLGEHLRALPGDRWNASFAEIERILGFRLPSSAREHRAWWANHSGGNHSQAAAWVKAGWETRDVDQKRERIGFER VRSQGQAAQQPAADLWAEAARITGIRDRGELERAAASALIQREAARKLALMGGSDPGATAAPRERSGA >Mature_147_residues GKYDPLGEHLRALPGDRWNASFAEIERILGFRLPSSAREHRAWWANHSGGNHSQAAAWVKAGWETRDVDQKRERIGFERV RSQGQAAQQPAADLWAEAARITGIRDRGELERAAASALIQREAARKLALMGGSDPGATAAPRERSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16249; Mature: 16118
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKYDPLGEHLRALPGDRWNASFAEIERILGFRLPSSAREHRAWWANHSGGNHSQAAAWV CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH KAGWETRDVDQKRERIGFERVRSQGQAAQQPAADLWAEAARITGIRDRGELERAAASALI HHCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QREAARKLALMGGSDPGATAAPRERSGA HHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GKYDPLGEHLRALPGDRWNASFAEIERILGFRLPSSAREHRAWWANHSGGNHSQAAAWV CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHH KAGWETRDVDQKRERIGFERVRSQGQAAQQPAADLWAEAARITGIRDRGELERAAASALI HHCCCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QREAARKLALMGGSDPGATAAPRERSGA HHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA