| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486165
Identifier: 103486165
GI number: 103486165
Start: 681462
End: 681977
Strand: Reverse
Name: 103486165
Synonym: Sala_0672
Alternate gene names: NA
Gene position: 681977-681462 (Counterclockwise)
Preceding gene: 103486166
Following gene: 103486164
Centisome position: 20.39
GC content: 59.11
Gene sequence:
>516_bases ATGAGCATTGCAGTTCGCCCCGCCACCTCGGATGACGCACCCGAACTTGCCGCGCTGATCAACGCCATCATTGCGCGCGG GGGAACCACCGCGCTGGAAACCCCTTTCACGCCCGATCAGCTTGACGCTGCGTTCCTCACCGGGCCGGACGTGTGGTGTT GCTTTGTAGCCGTCGGTCCGGAAGGCTGTCTGGAAGGATTCCAGACGTTGCTTCGCGAGGATGGCTATCCGGCGGATTGG GGCGACATTGGCACCTTCACGCGGATCGACGGGATACAGAAGGGTGTCGGCACAGCGCTGTTTGCCGCCACGCGGGCGCG CGCAAGCGAACTCGGTCTCGCCGCGATCAACGCGACGATTCGTGCGGACAATAAGGGCGGACTTACCTTCTATTCGAAAA TGGGAATGGAAGATTATGCTGTTGATCGGGGGCAACAGCTCGCCGACGGCACAGCTGTCGACCGCATTCACAAACGCTAT TTTCTGAAAATCGATGGACATGATGCTGAAAATTGA
Upstream 100 bases:
>100_bases AGGCCGATGGCCCCCACCCCAACCCCTCCCCTGAAGGGGAGGGGCTTAAGAGGGTCGAGGCGCAGAAATTGCTGGGGATT TCGCTTGAGGGGAGCGTGGG
Downstream 100 bases:
>100_bases AAACCTTCACGCCACCGTCGCCGACAAGCCGATCCTCAAGGGTCTGTCGCTCGCCATCAATGCGGGCGAGATCCATGCGA TCATGGGGCCGAATGGCGCG
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase; Acetyltransferase Protein; Acetyltransferase GNAT Family
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSIAVRPATSDDAPELAALINAIIARGGTTALETPFTPDQLDAAFLTGPDVWCCFVAVGPEGCLEGFQTLLREDGYPADW GDIGTFTRIDGIQKGVGTALFAATRARASELGLAAINATIRADNKGGLTFYSKMGMEDYAVDRGQQLADGTAVDRIHKRY FLKIDGHDAEN
Sequences:
>Translated_171_residues MSIAVRPATSDDAPELAALINAIIARGGTTALETPFTPDQLDAAFLTGPDVWCCFVAVGPEGCLEGFQTLLREDGYPADW GDIGTFTRIDGIQKGVGTALFAATRARASELGLAAINATIRADNKGGLTFYSKMGMEDYAVDRGQQLADGTAVDRIHKRY FLKIDGHDAEN >Mature_170_residues SIAVRPATSDDAPELAALINAIIARGGTTALETPFTPDQLDAAFLTGPDVWCCFVAVGPEGCLEGFQTLLREDGYPADWG DIGTFTRIDGIQKGVGTALFAATRARASELGLAAINATIRADNKGGLTFYSKMGMEDYAVDRGQQLADGTAVDRIHKRYF LKIDGHDAEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18200; Mature: 18068
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAVRPATSDDAPELAALINAIIARGGTTALETPFTPDQLDAAFLTGPDVWCCFVAVGP CCEEECCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCEEEEEEEECC EGCLEGFQTLLREDGYPADWGDIGTFTRIDGIQKGVGTALFAATRARASELGLAAINATI HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE RADNKGGLTFYSKMGMEDYAVDRGQQLADGTAVDRIHKRYFLKIDGHDAEN EECCCCCEEEEECCCCHHHHHCCCCHHHCCHHHHHHHHEEEEEECCCCCCC >Mature Secondary Structure SIAVRPATSDDAPELAALINAIIARGGTTALETPFTPDQLDAAFLTGPDVWCCFVAVGP CEEECCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEECCCCEEEEEEEECC EGCLEGFQTLLREDGYPADWGDIGTFTRIDGIQKGVGTALFAATRARASELGLAAINATI HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE RADNKGGLTFYSKMGMEDYAVDRGQQLADGTAVDRIHKRYFLKIDGHDAEN EECCCCCEEEEECCCCHHHHHCCCCHHHCCHHHHHHHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA