| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486101
Identifier: 103486101
GI number: 103486101
Start: 618574
End: 619089
Strand: Reverse
Name: 103486101
Synonym: Sala_0608
Alternate gene names: NA
Gene position: 619089-618574 (Counterclockwise)
Preceding gene: 103486108
Following gene: 103486100
Centisome position: 18.51
GC content: 63.95
Gene sequence:
>516_bases ATGCGCCGGATCCTGTCATGCTCGATCGCCCTGGCCAGTTCCGCGACTGTGCTCTCGTCCTGCGCGGCGCTGCCCGAACC GCCCGAAAGCCTCGCTGCTTATTGGCACGCGAGGACCGATCCCCATGGCTATGTCGCGAGCATAGGCTATTTCACCCCGG CGCAAATGCGCGATGCCGACTGGGAGTTCAGGCGCATACAAAACGCCGCGGGATCGCTTTGTACCGGATATCGCTATGCG GTCCGGCGCGACGTGCAATGGTTCAAAACGCGGCCCGGCTCCCATGGCCGCTGCGCCCGCGTCATCTATAGTTTTCGGTG CATGGCAGAAGCCGACATAGGTAAGCCGATCCCGCCCGATGCGCTGGAAGCCACCCGTGCACACATCATGTCGCAGCCGG TGGAAAAGCCGCTCGAACCGGATTGCGGAGAAAAGGACTCAACCAAGATTCACCGCCCGCGCCCCCAGCCGGACGCGCCT GCCCACCCGGCCGGCGCAATGCCGCATCAGCAATGA
Upstream 100 bases:
>100_bases CGATGCGCGGGAGTCGGCAAGGGGGAAAGCGGGGCGGACAAAATGGCGGACGGTTGCGCCATCAGCCACTTTGTTAACCG CTCTCCTTTAGTGTTGGGCC
Downstream 100 bases:
>100_bases TCTCCCCGAAACGCGGCCCGCTACCTCGGTTCGGCGGGCGGCAACGCCATTACCGCCCGTTCCATGATCCACGCGGCGGA CCAACGCACATGCCTCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRRILSCSIALASSATVLSSCAALPEPPESLAAYWHARTDPHGYVASIGYFTPAQMRDADWEFRRIQNAAGSLCTGYRYA VRRDVQWFKTRPGSHGRCARVIYSFRCMAEADIGKPIPPDALEATRAHIMSQPVEKPLEPDCGEKDSTKIHRPRPQPDAP AHPAGAMPHQQ
Sequences:
>Translated_171_residues MRRILSCSIALASSATVLSSCAALPEPPESLAAYWHARTDPHGYVASIGYFTPAQMRDADWEFRRIQNAAGSLCTGYRYA VRRDVQWFKTRPGSHGRCARVIYSFRCMAEADIGKPIPPDALEATRAHIMSQPVEKPLEPDCGEKDSTKIHRPRPQPDAP AHPAGAMPHQQ >Mature_171_residues MRRILSCSIALASSATVLSSCAALPEPPESLAAYWHARTDPHGYVASIGYFTPAQMRDADWEFRRIQNAAGSLCTGYRYA VRRDVQWFKTRPGSHGRCARVIYSFRCMAEADIGKPIPPDALEATRAHIMSQPVEKPLEPDCGEKDSTKIHRPRPQPDAP AHPAGAMPHQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18925; Mature: 18925
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILSCSIALASSATVLSSCAALPEPPESLAAYWHARTDPHGYVASIGYFTPAQMRDAD CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCC WEFRRIQNAAGSLCTGYRYAVRRDVQWFKTRPGSHGRCARVIYSFRCMAEADIGKPIPPD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH ALEATRAHIMSQPVEKPLEPDCGEKDSTKIHRPRPQPDAPAHPAGAMPHQQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRILSCSIALASSATVLSSCAALPEPPESLAAYWHARTDPHGYVASIGYFTPAQMRDAD CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCC WEFRRIQNAAGSLCTGYRYAVRRDVQWFKTRPGSHGRCARVIYSFRCMAEADIGKPIPPD HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCH ALEATRAHIMSQPVEKPLEPDCGEKDSTKIHRPRPQPDAPAHPAGAMPHQQ HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA