Click here to switch to the map view.

The map label for this gene is bkdR [H]

Identifier: 103486050

GI number: 103486050

Start: 571943

End: 572410

Strand: Reverse

Name: bkdR [H]

Synonym: Sala_0557

Alternate gene names: 103486050

Gene position: 572410-571943 (Counterclockwise)

Preceding gene: 103486053

Following gene: 103486049

Centisome position: 17.11

GC content: 65.81

Gene sequence:

>468_bases
ATGATTGATCGGATCGATGCAAAGCTGCTCCATCTGCTTCAGCGCGAGGGACCAAAACCTGCCGCCGAACTCGGCGAGAT
CGTCGGGCTGTCGCCGTCGGCCTGCCATCGCCGCATCCGCGCACTCGAAGCCCAGGGGATCATCACCGGCTATGCGGCGC
GCCTGTCGCCCGAACGCATCGGGCTGGGGCTCGACGTGTTCGTCGATATCAGCCTCACCTCGCAGAGCGAGGAGGCGCTG
ACCGCGTTCGAGAGCGCGGTCAAAAGTTTCGACGAGATTTTGGAATGCCAGCTCTTGTCGGGCGCCTCCGACTACCGGCT
GCGCGTCGCGGCGCGCAGCGTCGCCGATTTCGACCGGCTGCACCGCCATTGCCTGTCGCGCCTGCCCGGTGTCGCCGCGA
TGCACAGCGCCTTTGCGCTGCGCACGATCAAGGCGTTCGAGGGTTATCCGGTGTCCGCCGCCGGTTAA

Upstream 100 bases:

>100_bases
GACGAGAATAGCAGCAAAGCGCCGCGAGGTGCTTGCATATGATCCTTCGGTCCGGCACAAATGTGCAAGATTTTGCCGCC
ATATCGGGGTTTCGCGCACA

Downstream 100 bases:

>100_bases
CGGTCAATTTACCAGTCTTGCCGCATATCCCGTTCACCAGTTTCGTGGGACGCAAGGGGGCGAAGACCCGCGCGGCTTTG
GATCGACCAGGGATGGGATC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIDRIDAKLLHLLQREGPKPAAELGEIVGLSPSACHRRIRALEAQGIITGYAARLSPERIGLGLDVFVDISLTSQSEEAL
TAFESAVKSFDEILECQLLSGASDYRLRVAARSVADFDRLHRHCLSRLPGVAAMHSAFALRTIKAFEGYPVSAAG

Sequences:

>Translated_155_residues
MIDRIDAKLLHLLQREGPKPAAELGEIVGLSPSACHRRIRALEAQGIITGYAARLSPERIGLGLDVFVDISLTSQSEEAL
TAFESAVKSFDEILECQLLSGASDYRLRVAARSVADFDRLHRHCLSRLPGVAAMHSAFALRTIKAFEGYPVSAAG
>Mature_155_residues
MIDRIDAKLLHLLQREGPKPAAELGEIVGLSPSACHRRIRALEAQGIITGYAARLSPERIGLGLDVFVDISLTSQSEEAL
TAFESAVKSFDEILECQLLSGASDYRLRVAARSVADFDRLHRHCLSRLPGVAAMHSAFALRTIKAFEGYPVSAAG

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=38.4615384615385, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=35.0993377483444, Blast_Score=103, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 16786; Mature: 16786

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRIDAKLLHLLQREGPKPAAELGEIVGLSPSACHRRIRALEAQGIITGYAARLSPERI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
GLGLDVFVDISLTSQSEEALTAFESAVKSFDEILECQLLSGASDYRLRVAARSVADFDRL
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRHCLSRLPGVAAMHSAFALRTIKAFEGYPVSAAG
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIDRIDAKLLHLLQREGPKPAAELGEIVGLSPSACHRRIRALEAQGIITGYAARLSPERI
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
GLGLDVFVDISLTSQSEEALTAFESAVKSFDEILECQLLSGASDYRLRVAARSVADFDRL
CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HRHCLSRLPGVAAMHSAFALRTIKAFEGYPVSAAG
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]