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The map label for this gene is bdlA [H]

Identifier: 103486049

GI number: 103486049

Start: 570490

End: 571842

Strand: Reverse

Name: bdlA [H]

Synonym: Sala_0556

Alternate gene names: 103486049

Gene position: 571842-570490 (Counterclockwise)

Preceding gene: 103486050

Following gene: 103486048

Centisome position: 17.09

GC content: 65.19

Gene sequence:

>1353_bases
ATGGTGAAGGACAATCCGATTCACAAGCAACAGATCGATCCGATTTTGATGTCGGAACGCTTTCCTTATTATGATCTCGA
CGGACGGCTGGCGGCCAACGCCGCGGAAATCCACGCGATCATCGCGGGCCGCGAAGAGGCCGTCGCGCGCGCCTATTGGG
ATGCCTTCAACGCGCTGCCGAACATGGATCGCCGCGTCGAAGGCGAGCTTTACGACAGCTATGTCCGCGGCAGTGCGCGC
CACGCGTCGGTCAAATATGCCGACGCCGCCGGACAGGAAGCCGCGACGATCGCCTGCCAGAACACGCATATGGCGCGGCG
CGTCAAAATGCCGCTCGCATCGGTCATGTCGTGCATCGCCGAAAGCCAGCGGCTGACAATCGAATATGTCGTCGAAGCAT
GTATCGGCGATGCGGAGCGGCTGGCACGGCTGACGAGCGCGATCAACCGGCTCGCGCTGCTCGAGTTCGACATCATGCAG
CGCTATGCGAGCAAGCTCGATCGCGCGGTGATTTCCAGCGAACGACAGACGCTGGCACGCGATTTCGACCGCTCGATCGC
ATCGCTGGTGCAGGATACCGAGGGCGTACGCGAGCGGCTTGCCAGGCAGGCCGCCTCGGCCGACCAGGCCGCGAAAGGCA
TGATCGCCAAGACCAGCGAAGTCGCCGCGGCGTCCGAACAATCGGCGATGGCGATGCGCGAAGCCGCCTCCACCGCCGCG
GGCCTGATCCGCGCGATCGAGGATGCGCGCAGCGAAGTCGAAGCTTCGGCCAGCGTGGCGACGCGCGCGTCCGAACAGGC
GGGCGAAGCGGTCGCCATGTCGGAAGCCTTGTCGCATCACGCCGAATCGATCGAATCGATCCTGGGCCTGATCCGCGAAA
TTGCGGGACAGACCAACCTGCTCGCGCTCAACGCCACGATCGAGGCGGCGCGCGCGGGCGAATCGGGCCGCGGCTTTGCC
GTCGTCGCGCAGGAGGTGAAGAGCCTGGCCAACGAAACCGCGCGCGCCACCGACGACATCGCCGGCAAGATCGCCGCGAT
CCAGCAGGCCACGCGCGGATCGGTGAGCGCGAATCAATCGATCCAGCAAACGATCGTCGACGTCCAGCGTTCGGCGCAGC
GCATCCGCGAGGCGATGGATGCGCAGGCGCAGACGGTCACGTCGATCACCGCCGCTGTCGACGAAACGGCACTCGCCGCC
GACTCGATGTCGTCGACGATCGCGAGCATCCGTAACGACTCGGGGATGGTCGCGACCGAGATCAGCGTGCTGAGCCAGGA
GTTCGCCAAGATGGGCGGACGACTCCAGCAACTGGAACAGGCCGCGAGCGAGTTCAGCAGCCGGGTGGCGTAA

Upstream 100 bases:

>100_bases
CGGTCAATTTACCAGTCTTGCCGCATATCCCGTTCACCAGTTTCGTGGGACGCAAGGGGGCGAAGACCCGCGCGGCTTTG
GATCGACCAGGGATGGGATC

Downstream 100 bases:

>100_bases
GCTCACTTATTTCATCGTCATCCCGGCGAAGGCCGGGATCTCACCCTCGCCCTCTCACGCACCGGCGAGATCCCGGCCTT
CGCCGGGATGACGAGTTTGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MVKDNPIHKQQIDPILMSERFPYYDLDGRLAANAAEIHAIIAGREEAVARAYWDAFNALPNMDRRVEGELYDSYVRGSAR
HASVKYADAAGQEAATIACQNTHMARRVKMPLASVMSCIAESQRLTIEYVVEACIGDAERLARLTSAINRLALLEFDIMQ
RYASKLDRAVISSERQTLARDFDRSIASLVQDTEGVRERLARQAASADQAAKGMIAKTSEVAAASEQSAMAMREAASTAA
GLIRAIEDARSEVEASASVATRASEQAGEAVAMSEALSHHAESIESILGLIREIAGQTNLLALNATIEAARAGESGRGFA
VVAQEVKSLANETARATDDIAGKIAAIQQATRGSVSANQSIQQTIVDVQRSAQRIREAMDAQAQTVTSITAAVDETALAA
DSMSSTIASIRNDSGMVATEISVLSQEFAKMGGRLQQLEQAASEFSSRVA

Sequences:

>Translated_450_residues
MVKDNPIHKQQIDPILMSERFPYYDLDGRLAANAAEIHAIIAGREEAVARAYWDAFNALPNMDRRVEGELYDSYVRGSAR
HASVKYADAAGQEAATIACQNTHMARRVKMPLASVMSCIAESQRLTIEYVVEACIGDAERLARLTSAINRLALLEFDIMQ
RYASKLDRAVISSERQTLARDFDRSIASLVQDTEGVRERLARQAASADQAAKGMIAKTSEVAAASEQSAMAMREAASTAA
GLIRAIEDARSEVEASASVATRASEQAGEAVAMSEALSHHAESIESILGLIREIAGQTNLLALNATIEAARAGESGRGFA
VVAQEVKSLANETARATDDIAGKIAAIQQATRGSVSANQSIQQTIVDVQRSAQRIREAMDAQAQTVTSITAAVDETALAA
DSMSSTIASIRNDSGMVATEISVLSQEFAKMGGRLQQLEQAASEFSSRVA
>Mature_450_residues
MVKDNPIHKQQIDPILMSERFPYYDLDGRLAANAAEIHAIIAGREEAVARAYWDAFNALPNMDRRVEGELYDSYVRGSAR
HASVKYADAAGQEAATIACQNTHMARRVKMPLASVMSCIAESQRLTIEYVVEACIGDAERLARLTSAINRLALLEFDIMQ
RYASKLDRAVISSERQTLARDFDRSIASLVQDTEGVRERLARQAASADQAAKGMIAKTSEVAAASEQSAMAMREAASTAA
GLIRAIEDARSEVEASASVATRASEQAGEAVAMSEALSHHAESIESILGLIREIAGQTNLLALNATIEAARAGESGRGFA
VVAQEVKSLANETARATDDIAGKIAAIQQATRGSVSANQSIQQTIVDVQRSAQRIREAMDAQAQTVTSITAAVDETALAA
DSMSSTIASIRNDSGMVATEISVLSQEFAKMGGRLQQLEQAASEFSSRVA

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=187, Percent_Identity=36.3636363636364, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789453, Length=232, Percent_Identity=30.1724137931034, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788194, Length=174, Percent_Identity=34.4827586206897, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1788195, Length=243, Percent_Identity=30.4526748971193, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI2367378, Length=192, Percent_Identity=33.8541666666667, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 48126; Mature: 48126

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKDNPIHKQQIDPILMSERFPYYDLDGRLAANAAEIHAIIAGREEAVARAYWDAFNALP
CCCCCCCCHHHCCHHHHHCCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
NMDRRVEGELYDSYVRGSARHASVKYADAAGQEAATIACQNTHMARRVKMPLASVMSCIA
CCCHHHHHHHHHHHHCCCCHHCCEEEHHCCCCCHHEEEECCHHHHHHHHCCHHHHHHHHH
ESQRLTIEYVVEACIGDAERLARLTSAINRLALLEFDIMQRYASKLDRAVISSERQTLAR
HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFDRSIASLVQDTEGVRERLARQAASADQAAKGMIAKTSEVAAASEQSAMAMREAASTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIRAIEDARSEVEASASVATRASEQAGEAVAMSEALSHHAESIESILGLIREIAGQTNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LALNATIEAARAGESGRGFAVVAQEVKSLANETARATDDIAGKIAAIQQATRGSVSANQS
EEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IQQTIVDVQRSAQRIREAMDAQAQTVTSITAAVDETALAADSMSSTIASIRNDSGMVATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ISVLSQEFAKMGGRLQQLEQAASEFSSRVA
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKDNPIHKQQIDPILMSERFPYYDLDGRLAANAAEIHAIIAGREEAVARAYWDAFNALP
CCCCCCCCHHHCCHHHHHCCCCCCCCCCCHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCC
NMDRRVEGELYDSYVRGSARHASVKYADAAGQEAATIACQNTHMARRVKMPLASVMSCIA
CCCHHHHHHHHHHHHCCCCHHCCEEEHHCCCCCHHEEEECCHHHHHHHHCCHHHHHHHHH
ESQRLTIEYVVEACIGDAERLARLTSAINRLALLEFDIMQRYASKLDRAVISSERQTLAR
HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFDRSIASLVQDTEGVRERLARQAASADQAAKGMIAKTSEVAAASEQSAMAMREAASTAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIRAIEDARSEVEASASVATRASEQAGEAVAMSEALSHHAESIESILGLIREIAGQTNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LALNATIEAARAGESGRGFAVVAQEVKSLANETARATDDIAGKIAAIQQATRGSVSANQS
EEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
IQQTIVDVQRSAQRIREAMDAQAQTVTSITAAVDETALAADSMSSTIASIRNDSGMVATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ISVLSQEFAKMGGRLQQLEQAASEFSSRVA
HHHHHHHHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]