| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is lgt [H]
Identifier: 103485981
GI number: 103485981
Start: 504271
End: 505146
Strand: Reverse
Name: lgt [H]
Synonym: Sala_0488
Alternate gene names: 103485981
Gene position: 505146-504271 (Counterclockwise)
Preceding gene: 103485986
Following gene: 103485980
Centisome position: 15.1
GC content: 62.9
Gene sequence:
>876_bases ATGTTTCTTTTTGCAACCTTAGCCGAAGCAACGCAATATCTTAACTTTGAAGATATGATGGGCCCCAACAGCGAGATCGC GTTCAGCGTCTTCGGCCTGCCGATCCGCTGGTATGCGCTCGCCTATCTCGCCGGGATTTTCGTTGGTTACTGGTATCTGC TGAAGCTGATTGGGCGGCCTGGCGCCCCGATGGCGCGGCGCCACGCCGACGACATGATCTTCTATGCCATGCTCGGTATC ATCCTCGGCGGGCGGCTCGGCTATGTGCTCTTCTATAACCTCGGCGCCTATATCGAAGATCCGCTGGCGGTATTCAAACT GTGGGACGGCGGCATGTCGCTCCACGGCGGCGTCGTTGGCGTTCTGGTGGCGATCTGGTATGTGACGCGCAAGGACCAGC TCAGCTTCCTGCGCTTCTGCGACTATATCGCGTGCGTCGTTCCCTTTGGCCTCTTTTTCGGCCGCCTTGCCAATTTCGTG AACGGCGAGCTGTGGGGGCGCGCGACGACGGTGCCATGGGCGATCATCTTTCCGGACAGCGGCACGATGGACCCGCGCCA CCCCAGCCAGCTTTACGAAGCGGGGCTGGAGGGCCTGTTGATGATGGCGATCCTCGCCTTCTTCTTCTGGCGCACCGACG CGCGCTACAAGCCCGGCTTCCTGTTCGGCACGGCGGCGATCGTCTATGGCCTCAGCCGCTTCGCGGTCGAGTTCGTGCGC GAACCCGATGCCCAGCTCGGCACGCTGCCGTGGGGCCTCACCATGGGGCAGACGCTGACGATCCCGATGCTGCTCGCGGG CATCTGGCTCGTTGCGACCGCGAAGGGGCGCCGCCAGCGGATCGAGCCGATCGCCGGACCCGATGCCGTTGCGTGA
Upstream 100 bases:
>100_bases CGCAAATCGAGCGCTGATGGCATCGTGCATCTCTCCTCTTGGTCTCGCTCGCCTTACCCCTTATGGGGAGGCCTCTCCTG GGGAAGGACCGCGCGACTAT
Downstream 100 bases:
>100_bases AGCCCCTCCGACTCCCCGGCAACTGATAAACGACATCGCGGCGGCGCGGCCGGTGACGGTCGCCGACTATATGGCGGCGG CGAACGCACATTATTATGCG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFLFATLAEATQYLNFEDMMGPNSEIAFSVFGLPIRWYALAYLAGIFVGYWYLLKLIGRPGAPMARRHADDMIFYAMLGI ILGGRLGYVLFYNLGAYIEDPLAVFKLWDGGMSLHGGVVGVLVAIWYVTRKDQLSFLRFCDYIACVVPFGLFFGRLANFV NGELWGRATTVPWAIIFPDSGTMDPRHPSQLYEAGLEGLLMMAILAFFFWRTDARYKPGFLFGTAAIVYGLSRFAVEFVR EPDAQLGTLPWGLTMGQTLTIPMLLAGIWLVATAKGRRQRIEPIAGPDAVA
Sequences:
>Translated_291_residues MFLFATLAEATQYLNFEDMMGPNSEIAFSVFGLPIRWYALAYLAGIFVGYWYLLKLIGRPGAPMARRHADDMIFYAMLGI ILGGRLGYVLFYNLGAYIEDPLAVFKLWDGGMSLHGGVVGVLVAIWYVTRKDQLSFLRFCDYIACVVPFGLFFGRLANFV NGELWGRATTVPWAIIFPDSGTMDPRHPSQLYEAGLEGLLMMAILAFFFWRTDARYKPGFLFGTAAIVYGLSRFAVEFVR EPDAQLGTLPWGLTMGQTLTIPMLLAGIWLVATAKGRRQRIEPIAGPDAVA >Mature_291_residues MFLFATLAEATQYLNFEDMMGPNSEIAFSVFGLPIRWYALAYLAGIFVGYWYLLKLIGRPGAPMARRHADDMIFYAMLGI ILGGRLGYVLFYNLGAYIEDPLAVFKLWDGGMSLHGGVVGVLVAIWYVTRKDQLSFLRFCDYIACVVPFGLFFGRLANFV NGELWGRATTVPWAIIFPDSGTMDPRHPSQLYEAGLEGLLMMAILAFFFWRTDARYKPGFLFGTAAIVYGLSRFAVEFVR EPDAQLGTLPWGLTMGQTLTIPMLLAGIWLVATAKGRRQRIEPIAGPDAVA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=290, Percent_Identity=38.9655172413793, Blast_Score=198, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 32450; Mature: 32450
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFATLAEATQYLNFEDMMGPNSEIAFSVFGLPIRWYALAYLAGIFVGYWYLLKLIGRP CHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC GAPMARRHADDMIFYAMLGIILGGRLGYVLFYNLGAYIEDPLAVFKLWDGGMSLHGGVVG CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCHHHHHHHHCCCCCCCHHHHH VLVAIWYVTRKDQLSFLRFCDYIACVVPFGLFFGRLANFVNGELWGRATTVPWAIIFPDS HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCC GTMDPRHPSQLYEAGLEGLLMMAILAFFFWRTDARYKPGFLFGTAAIVYGLSRFAVEFVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EPDAQLGTLPWGLTMGQTLTIPMLLAGIWLVATAKGRRQRIEPIAGPDAVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MFLFATLAEATQYLNFEDMMGPNSEIAFSVFGLPIRWYALAYLAGIFVGYWYLLKLIGRP CHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC GAPMARRHADDMIFYAMLGIILGGRLGYVLFYNLGAYIEDPLAVFKLWDGGMSLHGGVVG CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHCHHHHHHHHCCCCCCCHHHHH VLVAIWYVTRKDQLSFLRFCDYIACVVPFGLFFGRLANFVNGELWGRATTVPWAIIFPDS HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEECCC GTMDPRHPSQLYEAGLEGLLMMAILAFFFWRTDARYKPGFLFGTAAIVYGLSRFAVEFVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EPDAQLGTLPWGLTMGQTLTIPMLLAGIWLVATAKGRRQRIEPIAGPDAVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA