| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485979
Identifier: 103485979
GI number: 103485979
Start: 502699
End: 503217
Strand: Reverse
Name: 103485979
Synonym: Sala_0486
Alternate gene names: NA
Gene position: 503217-502699 (Counterclockwise)
Preceding gene: 103485980
Following gene: 103485978
Centisome position: 15.04
GC content: 64.93
Gene sequence:
>519_bases ATGAGCGCCATCCAGCTCGCCGAACCCGCCGATGCCGAAGCGATCAGCGCCTTTGCCGAGGCGTCGTTCAAAGACACCTT CGCGCATCTTTACGATCCCGCCGACCTCGCCGCCTTCCTTGCCGACTGGAACCCGCCCGCGCGCGTTCGCGCGCAGATCG CGGACCCCGATCATGGCATTGCGCTGGTGCGCGGAGAGGGCGGGGCCATCCTGGGCTTCATCAAGATGGGGCCGGTCGAT TTCGACCTGCCGCCCGATCAGCCGACCGACGATGCGGTTGAACTGCACCAGCTTTATGTCGCCGAAGCCGCGAAGGGCAC CGGCGTTGCTGCGGCGCTGATGGACTGGGGCATCGCCTGGGCGCGGGCGCGCGCGTCGATCCTCTATCTCTCGGTCTTTG TCGAGAATAACCGCGCGCAGGCCTTTTACCGCCGCTATGGCTTCGTCGATGTCGGCCGCAACGCCTTTCGCGTCGGCAAT CATATCGACGAAGATCGTTTCTTCCGGCTCGACCTGTGA
Upstream 100 bases:
>100_bases ACCGGCTGGTGAACGCCGACGCGATGGGCGAGCTTTTCAAGGCGATCGCCTTCACCGCGCCGAACTGGCCCACGCCCGCT GGTTTCACAGGAGATCCCCT
Downstream 100 bases:
>100_bases ACGCGCCTTTTGTCACCGCGCCGACGCTGGACGGCATCGCGCACGGATTTTTCGGGCGCCGCGGCGGCGTGTCGACGGGT GATCTTGCCTCGCTCAATTG
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Family Protein; GCN5-Like N-Acetyltransferase; Acetyltransferase-GNAT Family; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSAIQLAEPADAEAISAFAEASFKDTFAHLYDPADLAAFLADWNPPARVRAQIADPDHGIALVRGEGGAILGFIKMGPVD FDLPPDQPTDDAVELHQLYVAEAAKGTGVAAALMDWGIAWARARASILYLSVFVENNRAQAFYRRYGFVDVGRNAFRVGN HIDEDRFFRLDL
Sequences:
>Translated_172_residues MSAIQLAEPADAEAISAFAEASFKDTFAHLYDPADLAAFLADWNPPARVRAQIADPDHGIALVRGEGGAILGFIKMGPVD FDLPPDQPTDDAVELHQLYVAEAAKGTGVAAALMDWGIAWARARASILYLSVFVENNRAQAFYRRYGFVDVGRNAFRVGN HIDEDRFFRLDL >Mature_171_residues SAIQLAEPADAEAISAFAEASFKDTFAHLYDPADLAAFLADWNPPARVRAQIADPDHGIALVRGEGGAILGFIKMGPVDF DLPPDQPTDDAVELHQLYVAEAAKGTGVAAALMDWGIAWARARASILYLSVFVENNRAQAFYRRYGFVDVGRNAFRVGNH IDEDRFFRLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18825; Mature: 18694
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIQLAEPADAEAISAFAEASFKDTFAHLYDPADLAAFLADWNPPARVRAQIADPDHGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCCCCE ALVRGEGGAILGFIKMGPVDFDLPPDQPTDDAVELHQLYVAEAAKGTGVAAALMDWGIAW EEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARARASILYLSVFVENNRAQAFYRRYGFVDVGRNAFRVGNHIDEDRFFRLDL HHHHHEEEEEEEEEECCCHHHHHHHCCCEECCCCCEECCCCCCCCCEEEECC >Mature Secondary Structure SAIQLAEPADAEAISAFAEASFKDTFAHLYDPADLAAFLADWNPPARVRAQIADPDHGI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCCCCE ALVRGEGGAILGFIKMGPVDFDLPPDQPTDDAVELHQLYVAEAAKGTGVAAALMDWGIAW EEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ARARASILYLSVFVENNRAQAFYRRYGFVDVGRNAFRVGNHIDEDRFFRLDL HHHHHEEEEEEEEEECCCHHHHHHHCCCEECCCCCEECCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA