Click here to switch to the map view.

The map label for this gene is 103485971

Identifier: 103485971

GI number: 103485971

Start: 494439

End: 495038

Strand: Reverse

Name: 103485971

Synonym: Sala_0478

Alternate gene names: NA

Gene position: 495038-494439 (Counterclockwise)

Preceding gene: 103485972

Following gene: 103485970

Centisome position: 14.8

GC content: 71.0

Gene sequence:

>600_bases
ATGATTCGCCGCATCCGCACCCCCCTGCTTGCCCTCCTCGGCGCGGCAACGCTTTCGGCGTGCTTCAGCCTCGGCGGCAA
GCCGCCGCCCTTTCTGCTGACGCTCGATCCCGACGCCGCGCCCGCGACGGGGACCGCCCGCACCGCCGCCGACGCCGCGA
CGCTGACCATCCTGATCCCGACGGCGCCGCAAAAGCTGCGCACGACGCGCATCCCGGTGCAGCAGGACGATGCCAGCATC
GCCTATGTCCAGGATGCACAATGGGTCGAGGCGCCGCAGCGCCTGTTCCAGCGGCTCGTGTCCGAAACCGTCGCCGCGCG
CACGTCGCGCGTCGTGCTCGACGAGGGGCAATATCTGACCGCACCTGGCGAGCAGCTCGCCGGGCAGCTCATGGAGTTCG
GCGTCGATGCGCGGTCGAACGAGGCCCTCGTCGTCTATCAGGCGATGCTCGTGTCGGCAGGGGGCAAGACGGTCACCCAG
CGCCGCTTCGAGACGCGCGAGCCGATCGGCGGCAAGGTCGAGGCGAAACCCGTCGGCGAGGCGTTGACCCGCGCCGCCAA
CCGCGTCGCGCTCGACGTCGCGGCGTGGCTCGGCGAATAG

Upstream 100 bases:

>100_bases
CGGCCTCGCTCTCCAGCCTGACCGACAAGCTCGACCAGCAGGGCGCGGGCGCGGTGCTCGGTGGCAGCAAGCTCCCCGAT
TACAAGGAATGAGGACCGCC

Downstream 100 bases:

>100_bases
CAAGGCCGCCGCGGTCGTAGCGGTTTCGATTACGTCCGACGTAATCGCTCCGGCTCGCATGGTGCAATAAGAAGCCTCGA
TCAAACGATGGAGGCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ABC-Type Transport System Auxiliary Component

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MIRRIRTPLLALLGAATLSACFSLGGKPPPFLLTLDPDAAPATGTARTAADAATLTILIPTAPQKLRTTRIPVQQDDASI
AYVQDAQWVEAPQRLFQRLVSETVAARTSRVVLDEGQYLTAPGEQLAGQLMEFGVDARSNEALVVYQAMLVSAGGKTVTQ
RRFETREPIGGKVEAKPVGEALTRAANRVALDVAAWLGE

Sequences:

>Translated_199_residues
MIRRIRTPLLALLGAATLSACFSLGGKPPPFLLTLDPDAAPATGTARTAADAATLTILIPTAPQKLRTTRIPVQQDDASI
AYVQDAQWVEAPQRLFQRLVSETVAARTSRVVLDEGQYLTAPGEQLAGQLMEFGVDARSNEALVVYQAMLVSAGGKTVTQ
RRFETREPIGGKVEAKPVGEALTRAANRVALDVAAWLGE
>Mature_199_residues
MIRRIRTPLLALLGAATLSACFSLGGKPPPFLLTLDPDAAPATGTARTAADAATLTILIPTAPQKLRTTRIPVQQDDASI
AYVQDAQWVEAPQRLFQRLVSETVAARTSRVVLDEGQYLTAPGEQLAGQLMEFGVDARSNEALVVYQAMLVSAGGKTVTQ
RRFETREPIGGKVEAKPVGEALTRAANRVALDVAAWLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21221; Mature: 21221

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRIRTPLLALLGAATLSACFSLGGKPPPFLLTLDPDAAPATGTARTAADAATLTILIP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEEEEEC
TAPQKLRTTRIPVQQDDASIAYVQDAQWVEAPQRLFQRLVSETVAARTSRVVLDEGQYLT
CCCHHHHHEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEE
APGEQLAGQLMEFGVDARSNEALVVYQAMLVSAGGKTVTQRRFETREPIGGKVEAKPVGE
CCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCHHHH
ALTRAANRVALDVAAWLGE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRRIRTPLLALLGAATLSACFSLGGKPPPFLLTLDPDAAPATGTARTAADAATLTILIP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHCCCEEEEEEEC
TAPQKLRTTRIPVQQDDASIAYVQDAQWVEAPQRLFQRLVSETVAARTSRVVLDEGQYLT
CCCHHHHHEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEE
APGEQLAGQLMEFGVDARSNEALVVYQAMLVSAGGKTVTQRRFETREPIGGKVEAKPVGE
CCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCEEECCHHHH
ALTRAANRVALDVAAWLGE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA