Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485970

Identifier: 103485970

GI number: 103485970

Start: 493422

End: 494192

Strand: Reverse

Name: 103485970

Synonym: Sala_0477

Alternate gene names: NA

Gene position: 494192-493422 (Counterclockwise)

Preceding gene: 103485971

Following gene: 103485969

Centisome position: 14.77

GC content: 68.09

Gene sequence:

>771_bases
GTGCGCGACTGGGGCGCGGGATCGCCGGTGCTCTTCCTGTCGGGATGGGCGTTGCCGTCGGATTTCTGGGGCTATCAAAT
GCTGGCCGTCGCACGCCAGGGCTATCGCGCTGTCGCCTATGACCGGCGCGGGCACGGGCGGTCGGCCGATCCGGGGCGCA
GTTATGACCATGATACGCTCGCCGACGATCTGGCATCGGTGATCGACGCGCTGGGTCTCGGCGGCGTGACGGTCGTCGCG
CATTCGATGGGCGGAACCGAGGTCGCGCGCCATTTCGCGCGGCACGGCGGCGGCGGCATCGCACGCGTCGTGCTGGTCGG
CACGATCACGCCCTTCCTGATGAAAAGCCCCGACAATCCCGCGGGGGTCGATCCGGCGCTACTTGCCGAGGGCGCGGCGC
TTCTCGCGCGTGATTTCCCGGCTTGGATCGAGGTGAATACGCCGCCCTTCTTCACCCCCGACACCTCGCCCGCGATGATC
CGTTGGGGGCAAAATATGATGATGTCGACGTCGCTGCTGGGCGCCGCACAGCTGGCCGCGGCCAATTTCGCGACCGATTT
TCGTCCCGACGTGCGGCAAATCAATGTGCCGACATTGCTGATCCATGGCGACCGCGACGTCTCGGCGCCGCTCGCCCTCA
CCGCGCAGGCGACCGCGGCGCTGCTGCCGCAGGCGACGCTCAAGGTTTACGAAGGCGCGCCGCACGGTCTGCCGCTGACG
CATGTCGAGCGGCTGAACGGCGACCTCATCGCCTTCCTCACCGGCGGCTGA

Upstream 100 bases:

>100_bases
AGCAATAACCCTTGCCCCCCGCCGGAGCCGCGCAGCCGAAACCGCAGCAAGCCCCCCCGCCGAAGGCTACGTCGCGGCGA
AGGACGGAACCTCGCTTTTC

Downstream 100 bases:

>100_bases
CGGGCTTGCCAGCGTCCGCCTGGCGGCCTATCAGCCCCGGCGCGCGCGGCCTCTTTCGGGTTTCCGGCCCGCGCCTTCTC
GACGAGCCCGCCGACCCGAA

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Aryl-ester hydrolase; PFE; Putative bromoperoxidase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA
HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI
RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT
HVERLNGDLIAFLTGG

Sequences:

>Translated_256_residues
MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA
HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI
RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT
HVERLNGDLIAFLTGG
>Mature_256_residues
MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA
HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI
RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT
HVERLNGDLIAFLTGG

Specific function: Bifunctional enzyme, capable of both ester hydrolysis and halogenation. Has a low bromoperoxidase activity. Acts on many phenolic esters [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.2 [H]

Molecular weight: Translated: 27047; Mature: 27047

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTL
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH
ADDLASVIDALGLGGVTVVAHSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNP
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHCHHHEECCCCC
AGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMIRWGQNMMMSTSLLGAAQLAA
CCCCHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHH
ANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT
HHHCCCCCCCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCHHHHHEECCCCCCCCHH
HVERLNGDLIAFLTGG
HHHHCCCCEEEEEECC
>Mature Secondary Structure
MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTL
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH
ADDLASVIDALGLGGVTVVAHSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNP
HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHCHHHEECCCCC
AGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMIRWGQNMMMSTSLLGAAQLAA
CCCCHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHH
ANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT
HHHCCCCCCCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCHHHHHEECCCCCCCCHH
HVERLNGDLIAFLTGG
HHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1368608; 7704276 [H]