| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485970
Identifier: 103485970
GI number: 103485970
Start: 493422
End: 494192
Strand: Reverse
Name: 103485970
Synonym: Sala_0477
Alternate gene names: NA
Gene position: 494192-493422 (Counterclockwise)
Preceding gene: 103485971
Following gene: 103485969
Centisome position: 14.77
GC content: 68.09
Gene sequence:
>771_bases GTGCGCGACTGGGGCGCGGGATCGCCGGTGCTCTTCCTGTCGGGATGGGCGTTGCCGTCGGATTTCTGGGGCTATCAAAT GCTGGCCGTCGCACGCCAGGGCTATCGCGCTGTCGCCTATGACCGGCGCGGGCACGGGCGGTCGGCCGATCCGGGGCGCA GTTATGACCATGATACGCTCGCCGACGATCTGGCATCGGTGATCGACGCGCTGGGTCTCGGCGGCGTGACGGTCGTCGCG CATTCGATGGGCGGAACCGAGGTCGCGCGCCATTTCGCGCGGCACGGCGGCGGCGGCATCGCACGCGTCGTGCTGGTCGG CACGATCACGCCCTTCCTGATGAAAAGCCCCGACAATCCCGCGGGGGTCGATCCGGCGCTACTTGCCGAGGGCGCGGCGC TTCTCGCGCGTGATTTCCCGGCTTGGATCGAGGTGAATACGCCGCCCTTCTTCACCCCCGACACCTCGCCCGCGATGATC CGTTGGGGGCAAAATATGATGATGTCGACGTCGCTGCTGGGCGCCGCACAGCTGGCCGCGGCCAATTTCGCGACCGATTT TCGTCCCGACGTGCGGCAAATCAATGTGCCGACATTGCTGATCCATGGCGACCGCGACGTCTCGGCGCCGCTCGCCCTCA CCGCGCAGGCGACCGCGGCGCTGCTGCCGCAGGCGACGCTCAAGGTTTACGAAGGCGCGCCGCACGGTCTGCCGCTGACG CATGTCGAGCGGCTGAACGGCGACCTCATCGCCTTCCTCACCGGCGGCTGA
Upstream 100 bases:
>100_bases AGCAATAACCCTTGCCCCCCGCCGGAGCCGCGCAGCCGAAACCGCAGCAAGCCCCCCCGCCGAAGGCTACGTCGCGGCGA AGGACGGAACCTCGCTTTTC
Downstream 100 bases:
>100_bases CGGGCTTGCCAGCGTCCGCCTGGCGGCCTATCAGCCCCGGCGCGCGCGGCCTCTTTCGGGTTTCCGGCCCGCGCCTTCTC GACGAGCCCGCCGACCCGAA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: Aryl-ester hydrolase; PFE; Putative bromoperoxidase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT HVERLNGDLIAFLTGG
Sequences:
>Translated_256_residues MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT HVERLNGDLIAFLTGG >Mature_256_residues MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTLADDLASVIDALGLGGVTVVA HSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNPAGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMI RWGQNMMMSTSLLGAAQLAAANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT HVERLNGDLIAFLTGG
Specific function: Bifunctional enzyme, capable of both ester hydrolysis and halogenation. Has a low bromoperoxidase activity. Acts on many phenolic esters [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.2 [H]
Molecular weight: Translated: 27047; Mature: 27047
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTL CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH ADDLASVIDALGLGGVTVVAHSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNP HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHCHHHEECCCCC AGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMIRWGQNMMMSTSLLGAAQLAA CCCCHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHH ANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT HHHCCCCCCCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCHHHHHEECCCCCCCCHH HVERLNGDLIAFLTGG HHHHCCCCEEEEEECC >Mature Secondary Structure MRDWGAGSPVLFLSGWALPSDFWGYQMLAVARQGYRAVAYDRRGHGRSADPGRSYDHDTL CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH ADDLASVIDALGLGGVTVVAHSMGGTEVARHFARHGGGGIARVVLVGTITPFLMKSPDNP HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEHHHHHCHHHEECCCCC AGVDPALLAEGAALLARDFPAWIEVNTPPFFTPDTSPAMIRWGQNMMMSTSLLGAAQLAA CCCCHHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHH ANFATDFRPDVRQINVPTLLIHGDRDVSAPLALTAQATAALLPQATLKVYEGAPHGLPLT HHHCCCCCCCCEEECCCEEEEECCCCCCCCEEEHHHHHHHHCCHHHHHEECCCCCCCCHH HVERLNGDLIAFLTGG HHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1368608; 7704276 [H]