Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yeeZ [C]

Identifier: 103485967

GI number: 103485967

Start: 489401

End: 490189

Strand: Reverse

Name: yeeZ [C]

Synonym: Sala_0474

Alternate gene names: 103485967

Gene position: 490189-489401 (Counterclockwise)

Preceding gene: 103485969

Following gene: 103485961

Centisome position: 14.65

GC content: 70.47

Gene sequence:

>789_bases
ATGGCACGGATGCTGATTTTCGGGATGGGCTATGCGGCGGGGCACCTCGCCGAGCGGCTGCGCGCGCGCGGCTGGGAGGT
GACGGGAACGACGCGCGACGGTCGCGCGGACAGCATCGCCTTCGGTGACGAGACCGCCGTGCTCGCCGCGCTGCGCACCG
CGACGCACATATTGTCGTCAGTTCCGCCCGCGGGCGAAGCCGACCCGGTGCTCGCACGCTATGGCGAGGCGATCGCGCTC
GCCCCCGCAACCTGGACGGGCTATCTGTCCTCAACCGGCGTCTATGGCGATGCGGGCGGCGCCTGGGTCGACGAAAGCGC
ACCCGTCCGGGGCCGCCGCGCCGGGCGCAACGCCGCCGACGCCGCATGGAGCGCATTGCGCGGCGACATGTGCGTCTTTC
GCCTGCCCGGCATCTATGGCCCCGGCCGCTCGATTCTCGATCGCATCGCCGAAGGCCGCGCGCACCGCATCGCCCTGCCC
GACCAGGTGTTCAGCCGCATCCATGTCGATGACATTGCGGGCGGCATCATTGCGTCGTTCCGCGGCCCCGCGGGCGTCTA
TAACCTCGCCGACGACGAACCCTGCCACCAGAACCGCCTCGTCGAATGGGGCTGCGCCATGCTCGGCGCGCCGCTGCCGC
CGATGCAGTCGCTCGACGAAGCGGGCCTGTCGCCCGCCGCGCGCGCCTTCTATGCCGAAAACCGCCGCGTGGCAAACGGC
AAGGCGAAGCGATTGTTGGGGTGGAGACCGCGCTATCCGAGTTTTCGCGAGGGGCTCGCCAGCCTTTAG

Upstream 100 bases:

>100_bases
GTCGCCGCGATGGATGGTGACGGGAATGGCGGGGGTCGAGGAGGCGTCGGTCATGCGTTCGGTCTAGGCATCGCGGCGCC
GACGCGCAATAAGGCGCGCG

Downstream 100 bases:

>100_bases
ATCAGCACATCGACCGTGTGGATCGCCACCCCCACCAGCCCCCCAACGAGCGTGCCGTTGATGCGGATATATTGCAGATC
GTCGCCGACCGCATTTTCCA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; ActC Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; Actc Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MARMLIFGMGYAAGHLAERLRARGWEVTGTTRDGRADSIAFGDETAVLAALRTATHILSSVPPAGEADPVLARYGEAIAL
APATWTGYLSSTGVYGDAGGAWVDESAPVRGRRAGRNAADAAWSALRGDMCVFRLPGIYGPGRSILDRIAEGRAHRIALP
DQVFSRIHVDDIAGGIIASFRGPAGVYNLADDEPCHQNRLVEWGCAMLGAPLPPMQSLDEAGLSPAARAFYAENRRVANG
KAKRLLGWRPRYPSFREGLASL

Sequences:

>Translated_262_residues
MARMLIFGMGYAAGHLAERLRARGWEVTGTTRDGRADSIAFGDETAVLAALRTATHILSSVPPAGEADPVLARYGEAIAL
APATWTGYLSSTGVYGDAGGAWVDESAPVRGRRAGRNAADAAWSALRGDMCVFRLPGIYGPGRSILDRIAEGRAHRIALP
DQVFSRIHVDDIAGGIIASFRGPAGVYNLADDEPCHQNRLVEWGCAMLGAPLPPMQSLDEAGLSPAARAFYAENRRVANG
KAKRLLGWRPRYPSFREGLASL
>Mature_261_residues
ARMLIFGMGYAAGHLAERLRARGWEVTGTTRDGRADSIAFGDETAVLAALRTATHILSSVPPAGEADPVLARYGEAIALA
PATWTGYLSSTGVYGDAGGAWVDESAPVRGRRAGRNAADAAWSALRGDMCVFRLPGIYGPGRSILDRIAEGRAHRIALPD
QVFSRIHVDDIAGGIIASFRGPAGVYNLADDEPCHQNRLVEWGCAMLGAPLPPMQSLDEAGLSPAARAFYAENRRVANGK
AKRLLGWRPRYPSFREGLASL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27942; Mature: 27811

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMLIFGMGYAAGHLAERLRARGWEVTGTTRDGRADSIAFGDETAVLAALRTATHILSS
CCCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
VPPAGEADPVLARYGEAIALAPATWTGYLSSTGVYGDAGGAWVDESAPVRGRRAGRNAAD
CCCCCCCCHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH
AAWSALRGDMCVFRLPGIYGPGRSILDRIAEGRAHRIALPDQVFSRIHVDDIAGGIIASF
HHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
RGPAGVYNLADDEPCHQNRLVEWGCAMLGAPLPPMQSLDEAGLSPAARAFYAENRRVANG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCC
KAKRLLGWRPRYPSFREGLASL
HHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
ARMLIFGMGYAAGHLAERLRARGWEVTGTTRDGRADSIAFGDETAVLAALRTATHILSS
CCEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHHC
VPPAGEADPVLARYGEAIALAPATWTGYLSSTGVYGDAGGAWVDESAPVRGRRAGRNAAD
CCCCCCCCHHHHHCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH
AAWSALRGDMCVFRLPGIYGPGRSILDRIAEGRAHRIALPDQVFSRIHVDDIAGGIIASF
HHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHC
RGPAGVYNLADDEPCHQNRLVEWGCAMLGAPLPPMQSLDEAGLSPAARAFYAENRRVANG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCEECCC
KAKRLLGWRPRYPSFREGLASL
HHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA