Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485961

Identifier: 103485961

GI number: 103485961

Start: 481594

End: 481986

Strand: Reverse

Name: 103485961

Synonym: Sala_0468

Alternate gene names: NA

Gene position: 481986-481594 (Counterclockwise)

Preceding gene: 103485967

Following gene: 103485958

Centisome position: 14.41

GC content: 56.74

Gene sequence:

>393_bases
ATGGTTTGGTCGGCCCCCTTTCGGGGGCCGGCCTCACCTGAAAGGCCCTTCATCATCTCGTCCCGCGCTTCTGCCGAAAC
AGCTGCGCTTCAAAAGCGATGGACTGCCTTTCAATTGCCCGATCGGGTTCGCTTCAACTCGTGGGAATCGCAGCGTTCCG
TGATCGAACCATCGGTCGCTTTCCTCGTCAAACCCGTCCGTTCTCGTCCGGCTAGTCTTGCAACCACCCTTGATGTCCCG
GCGGTCCGACGTCTCTGTCGTCCGATGATTGGAAGCTGTCACGAACGCTTTTCGACGCCAACTAAAAAAGCGCGAAAATG
GCGCCCTAAAGGCCCGCGCTTGTGGATAAGTCCGGCATTAGCAACAAGCGGATTCGGTGCAGCATTTTTGTAA

Upstream 100 bases:

>100_bases
CCTGTCCCGTGCGCCTCGCCCCGCTTCATCCCGGTCCGCTTCTCTTTCGATCGGCAGCCCGCAAAACGATCGTTGCGACG
CACGCCGGAACAATCCGGCG

Downstream 100 bases:

>100_bases
CAAGGGTGCAGCATTTTTGGACTCGGGTTTCCCGCCAAAGCGCTTCGACTCGATCTTTGGATCGGTCGAATCACCCGACC
GAGTCGCGACTCACGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MVWSAPFRGPASPERPFIISSRASAETAALQKRWTAFQLPDRVRFNSWESQRSVIEPSVAFLVKPVRSRPASLATTLDVP
AVRRLCRPMIGSCHERFSTPTKKARKWRPKGPRLWISPALATSGFGAAFL

Sequences:

>Translated_130_residues
MVWSAPFRGPASPERPFIISSRASAETAALQKRWTAFQLPDRVRFNSWESQRSVIEPSVAFLVKPVRSRPASLATTLDVP
AVRRLCRPMIGSCHERFSTPTKKARKWRPKGPRLWISPALATSGFGAAFL
>Mature_130_residues
MVWSAPFRGPASPERPFIISSRASAETAALQKRWTAFQLPDRVRFNSWESQRSVIEPSVAFLVKPVRSRPASLATTLDVP
AVRRLCRPMIGSCHERFSTPTKKARKWRPKGPRLWISPALATSGFGAAFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14548; Mature: 14548

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWSAPFRGPASPERPFIISSRASAETAALQKRWTAFQLPDRVRFNSWESQRSVIEPSVA
CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHH
FLVKPVRSRPASLATTLDVPAVRRLCRPMIGSCHERFSTPTKKARKWRPKGPRLWISPAL
HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCH
ATSGFGAAFL
HCCCCCCCCC
>Mature Secondary Structure
MVWSAPFRGPASPERPFIISSRASAETAALQKRWTAFQLPDRVRFNSWESQRSVIEPSVA
CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHH
FLVKPVRSRPASLATTLDVPAVRRLCRPMIGSCHERFSTPTKKARKWRPKGPRLWISPAL
HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEECCCH
ATSGFGAAFL
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA